Gossypium arboreum (tree cotton): 108483089
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Entry
108483089 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108483089
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gab03041
]
108483089
03036 Chromosome and associated proteins [BR:
gab03036
]
108483089
Spliceosome [BR:
gab03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
108483089
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
108483089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_1
TPR_14
HAT_Syf1_CNRKL1_C
Lsm_interact
U3_assoc_6
HAT_Syf1_M
ARM_TT21_5th
Motif
Other DBs
NCBI-GeneID:
108483089
NCBI-ProteinID:
XP_017641787
UniProt:
A0A0B0NBN7
LinkDB
All DBs
Position
5:8525822..8535555
Genome browser
AA seq
831 aa
AA seq
DB search
MEEFEKPPVSMEEDTEMEESDAIENPKASQKSSSDSESSDSEEEADQNEQLLALEYELST
NPSNYDAHVQYIKLLRRSAEIEKLREARENMNTLFPLSPEMWMEWAKDEASLSNDSNFES
VEKLYERGISEYLSIPLWCEYLNYVQEHDPKVRDCLADGISKARNLFERAVTAAALHVSQ
GSQIWDAYIQYEQAILLTIDQSDIQAKEKQVQRIRSIFHRYLSIPLASLKSTLLAYKAWE
VEQGNSLDAEPGDVLGISSHVASAYQKAEEMYNAHVHHEEQITRQDISESERFQHYMSYL
DFEKSFGDPARVQILYERAITDFPVSNDLWLHYTHYLDKTLKVGNVVKDVYSRATRNCPW
VGELWVRYLLCLERGLACEKEISAAFEKSLKCTFSTLEEYLDLFLTRVDGLRRRISSAGG
DGVLNYSMIRESFQQAADYLSPHMKNTDGLLHLHAYWARLELKLGNDLIAARGVWESLLK
TCGSVLEAWKSYIAMEIELDHINEARAIYKRCYSKRFSGTGSEDICHSWLRFEREFGTLE
DLNHAVQKVTPRLEELQLFRLQQESKSFTGATDQREETLKNTSRERRKSGSSAIDEQPPA
KWQKYTSQNKKLHKKENTQGLNLAEANDGEEKEGKVEKKVNEKQMKDTKNTTSRLYKDQC
TAFVSNLNITAKDEDLHQFFSDVGGVTAIRILHDKFTGKSRGLAYVDFKDDVHLAAAVAK
NKQMFLGKKLSVARSNPKQGKRESLAHTAPGEEASNQSGGHGRSVSKESGEDSKGSRGRK
RVENIQLKGKNTFAVPRNVKPLGWTNKPGTREEEDEKPKSNDEFRKMFMKT
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggaggagtttgagaaaccaccagtttccatggaagaagacactgaaatggaggagagc
gatgctattgaaaaccctaaagccagtcagaaatccagcagcgattcggagtcaagcgat
tcagaagaggaagcagatcagaatgaacagctcttagccctagaatacgagctctccacc
aatccttccaactacgatgcacatgttcagtacataaagcttttgaggagaagtgctgaa
atagagaaactaagagaagcaagggaaaacatgaatacgctgtttccattgagtcctgaa
atgtggatggaatgggccaaagacgaagcttctctttctaatgattccaatttcgagtca
gtcgagaagctttacgagagaggcatctctgagtatctgtctatcccgctttggtgtgag
tacctaaattatgtgcaagaacacgatccaaaagtgcgtgattgtttagctgatggaatt
tcgaaggcaagaaatctgtttgagcgagctgttactgccgctgctcttcatgtttctcaa
ggatctcaaatatgggatgcatatatccaatacgagcaagctattttactaacgattgac
caatctgacatccaggctaaagagaaacaggtccagcgcatacggagtatattccatcga
tacttgtctattccccttgctagcttgaagtctactcttctagcctacaaggcatgggag
gtggagcaaggaaattctcttgatgctgaacctggcgatgttttagggatttcttcccat
gttgcttcggcttaccagaaggcagaggagatgtacaatgcccatgtacatcatgaagaa
cagattactagacaggatatatctgagtctgaaaggtttcaacattacatgagctacttg
gattttgaaaaatctttcggtgatccagcccgagttcaaattctgtatgaacgtgccata
actgactttcctgtatcaaatgatctctggcttcactatactcactatcttgataaaacc
ttgaaggtgggaaatgttgtgaaggatgtttattcgagggctacaagaaactgtccctgg
gttggagaactttgggttcgctatttgctgtgtctggagcgtggccttgcttgtgagaaa
gagatatctgctgcctttgagaagtcccttaaatgcacattttcaacccttgaggagtac
ctcgatttgttcctcacccgagtagatggcttgagacgtagaatttcatcagctggtgga
gatggtgtgttgaactattcaatgattagggaatcttttcagcaagcagcggattactta
tcaccacacatgaagaacactgatggtttactgcatttgcatgcctattgggcccgttta
gagctgaaattgggcaatgatttaattgcagctcgtggtgtttgggagagcttgcttaaa
acttgtggttcagtgttggaagcatggaaaagttatatagcaatggaaattgaattagat
catataaatgaagccagggccatatataagagatgctacagcaaaagatttagtggaacg
ggttcagaggacatctgccattcttggttgcgctttgagagggaattcggaacactggaa
gacctcaaccatgctgtgcaaaaggttactcctcgtcttgaggagctgcaattatttagg
ttacaacaggaatctaaatctttcactggagcaacagatcaaagagaggagacccttaag
aacacatctcgtgagaggaggaaatcaggttcaagtgcaattgatgagcagcctccagct
aagtggcaaaaatatacttctcaaaataagaaattgcacaagaaagagaacacacaaggg
ctgaacttagctgaagcaaacgatggggaagagaaagaaggcaaggttgagaaaaaggta
aatgagaaacagatgaaagacactaagaatactacatcaagattatataaagatcagtgc
actgcatttgtatcaaatcttaacattacggcaaaagacgaagatctccatcaattcttc
agtgatgttgggggggtcactgcaattcgaattctgcatgacaagttcactggaaaatca
aggggactggcatatgtggattttaaggatgatgtacaccttgctgcagctgtagcgaag
aataagcaaatgtttcttggaaagaagttgagtgttgcacggtcaaatccaaagcaaggc
aagagagaatcccttgctcatactgcacctggtgaagaagctagtaatcaaagtggaggc
catgggagatctgtatctaaagaatctggtgaagattcaaagggatctagaggtcgtaag
cgcgttgagaacatccagctcaaagggaagaacacatttgcagtgccaagaaatgttaaa
ccacttggatggactaacaaacctggaacccgggaagaggaagatgagaagccaaaatca
aatgatgagttcagaaaaatgtttatgaaaacctga
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