Gossypium arboreum (tree cotton): 108483109
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Entry
108483109 CDS
T05776
Name
(RefSeq) cyclic nucleotide-gated ion channel 4
KO
K05391
cyclic nucleotide gated channel, plant
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
108483109
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gab04040
]
108483109
Ion channels [BR:
gab04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
108483109
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
IQ
Motif
Other DBs
NCBI-GeneID:
108483109
NCBI-ProteinID:
XP_017641812
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Position
1:complement(113548933..113556446)
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AA seq
709 aa
AA seq
DB search
MASEHEFYPSRATPMQYFTDEDEGEEEGGEIEEESTDDEVCKEEEKENSSDWRSLYLMCG
GRRGGGRRLKSWSLGQVFFDPRAKWVQEWNRVFLLVCATGLFVDPLFFYALSISDTCMCL
FVDGWFAITVTALRCMTDALHVWNMCLQLKMIKRSSSSYGRGNDKRSGSESEGEGGDGGE
GSSNRPRAANGRHLAFQCLKAKKGLFFDLLVILPLPQIVLWVAIPSLLEKGSVTLVMTVF
LIIFLFQYLPKIYHSVCLLRRMQNLSGYIFGTVWWGIALNLIAYFVASHAAGACWYLLGI
QRSAKCLKEQCRGIENCDLRLLACKDPIYYGTRSMVRDRARLVWAETNRARSTCIDNPDN
YDYGAYKWTVQLVTNDSRLEKILFPIFWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLL
LVTMLIGNIKVFLHATTSKKQAMQLKMRNIEWWMRKRRLPSGFKQRVRNYERQRWAAMRG
VDECQMIRNLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLIFTKGETIT
REGDPVQRMLFVVRGHLQSSQVLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPPST
STLVTLETTEAFGLDAEDVKYVTQHFRYTFVNERVKRSARYYSPGWRTWAAVAIQLAWRR
YKHRLTLTSLSFIRPRRPLSRSNSLGEDRLRLYTAMLTSPKPNQDDFDF
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtgaacatgaattttatccttcacgtgcaacgcccatgcaatactttacggat
gaagacgaaggagaagaagaaggaggagaaatagaagaagaatcgacggacgacgaagtt
tgcaaagaagaagagaaagagaattcaagtgactggaggagtttgtatttgatgtgcggc
ggtcgccgcggcggtgggcgtcgccttaaaagttggtcactggggcaagtttttttcgac
ccgagggccaaatgggttcaagaatggaatagggttttcctcctggtatgcgcgacggga
ctgttcgtggacccattgttcttttacgccctgtccattagcgacacgtgcatgtgcctc
ttcgtggacgggtggttcgccatcaccgtgacggcgctccggtgcatgactgacgcgttg
cacgtgtggaacatgtgcctccagctcaaaatgatcaagagatcatcgtcgtcgtacggt
cgcggcaatgacaagaggagtgggagtgagagtgaaggcgaagggggtgacggcggagaa
ggaagcagcaaccgaccccgtgctgcgaatggccgccacctggccttccaatgcttgaaa
gccaaaaagggactcttctttgacctattggtaattctccctctgccacagattgtacta
tgggtggcaattccatcattattggaaaaaggatcggtaacgctagtaatgacggtgttc
ttgatcatcttcctcttccaatacctccccaagatctaccactccgtctgccttttacgt
cgaatgcagaacctttccggctacattttcggcactgtttggtgggggattgctctcaat
ttgattgcttatttcgtcgcctcacacgcggcgggggcatgttggtacttgttagggatt
caaagatcggctaagtgcttgaaagagcaatgtagagggatagagaattgtgacctgaga
ttattggcttgcaaagacccaatttactatggaacaagaagtatggtaagggatagagca
aggttggtttgggcagaaaccaatcgagcaaggagtacttgcattgataaccctgataac
tatgattatggagcttataaatggaccgttcagctagttaccaacgatagtcgtctcgag
aaaatactttttcctatcttttggggtcttatgactctcagcacatttgggaacttggag
agcacaacagaatggctggaggttgttttcaacatcattgttcttaccagtggacttctt
cttgtcacaatgttgattggtaacatcaaggtgtttttgcatgcaacaacgtccaagaaa
caagcaatgcaattgaagatgaggaacatagagtggtggatgaggaagaggcgcctgcct
tctggattcaagcaaagggtccgcaattatgagcggcaacggtgggcggccatgcgcggt
gtcgatgaatgccagatgatcagaaacctccccgaggggctccggagagatatcaagtac
catctttgcctggatttagttagacaggtaccattgtttcaacacatggatgatttggtc
ctagagaacatttgtgatcgtgtcaaatctctaattttcaccaaaggagaaactataaca
agggaaggcgacccagtacaaagaatgctatttgtagtaaggggacatctccaaagcagc
caagttcttagagatggtgtgaaaagttgctgcatgttagggcccggaaatttcagtggc
gatgagctcttgtcatggtgtcttcgaagacccttcattgagaggctcccaccatcgact
tccaccctcgtaacgcttgaaactaccgaggcatttggcctcgatgctgaggatgtcaaa
tacgtcacacaacatttccgttacacatttgttaacgaaagggtcaagaggagtgctcgg
tattattctcccggatggcggacttgggctgcggtggcgattcaattggcttggaggcgg
tacaaacaccggttaacccttacgtcgttgtcattcattaggcctcggaggccgttgtcg
agaagtaattcattgggggaggacagactcaggctttatacagctatgttaacttcacca
aaaccaaatcaagatgattttgatttttga
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