Gossypium arboreum (tree cotton): 108483148
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Entry
108483148 CDS
T05776
Name
(RefSeq) sister chromatid cohesion protein SCC4
KO
K11266
MAternally affected uncoordination
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gab03036
]
108483148
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
108483148
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cohesin_load
TPR_2
TPR_12
TPR_MalT
DUF1400
Motif
Other DBs
NCBI-GeneID:
108483148
NCBI-ProteinID:
XP_017641865
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Position
1:4163564..4173244
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AA seq
689 aa
AA seq
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MEAVAEGLWGLADEFEKKGEIGKAVKCLEAICQSHASFLPIVEVKTRLRIATILLRHSHN
VNHAKSHLERSQLLLNSIPSCFDLKCRTYSLLSQCYHLVGAIPPQKQILYKALHLTSAAA
PDVSAKLWCCNFNSQLANALIIEGDYQNSISTLESGYVSATQICYPELQMFFVASILHVR
LLMQWDDQTANEVERALQRCNQVWETMPSDRRAHCMGLLFYNELLHIFYRLRVSDYKNAV
KHVDKLDAAMKQDSKSRGQLTRFTTTTTTSAGNDSLEPTYFGNAKRALQDKLFLAPPPIN
GEWLPKSAVYALVDLMIIIFGRPKGNFKECDKRIQSGIHIIKEELIRLGITDDVREVDLQ
HSAIWMAGVYLMLLMQFLENKVAVELTRSEFLEAQEALMQMKNWFIRFPTILQACESIIE
MLRGQYSHSVGCYNEAAFHYVEAAKITESKSMQFMCQAYAAISYFCIGDAESSSQALDLI
GPVYRMKDSFVGVREEASILFAYGLLLMKQQDLQEARNRLAKGLQIAHVQMGNLQLVSQY
LTILGNLALALHDTGQAREILRSSLTLAKKLGDIPTQIWVLSVLTGLFQQLGERGNQMEN
DEYRRKKFDELQSRLADARSSIYHIELIDKVKLQVQQFHEIDMKRTMADESMRVNLDIPE
SVGLSTPMPVPSSSRLVDLDTGRRGKRKL
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggaagctgtggcagaagggctgtggggtctggcggatgagtttgagaagaagggagag
atagggaaggcggtgaagtgcttggaggcaatctgccagtctcacgcttccttccttccc
atcgttgaggtgaagactcgactccgcatagccactattctgctgcgccactcgcacaac
gtgaaccatgctaagtcccaccttgaacgctcacaattgctccttaattccataccttca
tgcttcgacttgaagtgccgaacctactcactgctcagccagtgctaccatctcgttggg
gctatccctcctcagaagcagatcttgtacaaggctcttcaccttacttctgcggcggct
cccgatgtttcggccaagttatggtgttgcaacttcaattctcagctggcaaacgctctg
attattgaaggagactaccagaactcaatctccactttagaatcaggttatgtatccgct
actcaaatttgctatccggagcttcagatgttctttgtggcttccatcctgcatgtccgc
ctccttatgcaatgggatgatcaaactgcgaatgaggttgagcgagctcttcagagatgc
aatcaggtctgggagactatgccctctgataggagagcccactgcatgggtttactcttt
tacaatgagctcctccacatcttctatcgacttcgtgtctctgattacaagaatgctgtc
aaacacgtggacaaattggatgctgctatgaagcaagattccaagtctcggggacagctt
acccgttttactactaccaccaccacttcagctggaaatgattctcttgaacccacatat
tttggaaatgccaaacgggcattgcaagataagcttttcctcgcaccacctcccattaat
ggggaatggctgccaaaaagtgctgtctatgcccttgttgatcttatgatcatcattttt
ggccgtccaaaaggaaatttcaaagagtgtgataaacgaattcagtctggaatacatatc
atcaaagaggaactcatcaggcttggtataactgatgatgtgagagaagtggacttgcag
cactcggcgatctggatggctggtgtatatttaatgctattgatgcagttccttgagaat
aaagtggctgtggagcttacacggtctgaatttcttgaagctcaagaggcattgatgcaa
atgaagaactggttcattcgctttccaacaattttacaagcttgtgagagcatcatcgaa
atgcttagggggcaatattcccattctgttggctgttataatgaagcagcttttcactat
gtagaagctgcaaagataactgagagcaaatcaatgcaattcatgtgccaagcttatgca
gccatttcatacttttgcattggtgatgctgaatcgtcttcacaggcgcttgatttaatt
ggaccagtttacagaatgaaggattcctttgttggagttcgtgaggaagcaagcatcctt
tttgcttatggccttctattgatgaagcagcaagatctacaagaagcacgaaaccggctg
gccaagggtttgcagattgctcatgttcaaatggggaaccttcaacttgtttctcagtat
ttgaccattcttgggaatttggcacttgctctgcatgacactggacaggccagagagatc
ctaagatcctcactaactctagcaaagaagcttggtgatatcccaactcagatatgggtt
ctgtctgttttgacaggtctttttcaacaattaggtgagaggggaaatcaaatggagaat
gatgagtacagaagaaaaaagttcgatgaattgcaatcgagacttgctgatgcacgttca
tccatctatcatattgaacttattgacaaagtaaaacttcaagttcagcaatttcatgag
attgatatgaagcgtacaatggcagacgaatctatgagagtcaatcttgacatcccagaa
tcagttggcttatcaacaccaatgccagtcccatcatcatccaggctggttgatttagat
actggaagacgtggtaagagaaaactttaa
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