Gossypium arboreum (tree cotton): 108483217
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Entry
108483217 CDS
T05776
Name
(RefSeq) protein transport protein SEC16B homolog
KO
K20353
COPII coat assembly protein SEC16
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108483217
Membrane trafficking [BR:
gab04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
108483217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
108483217
NCBI-ProteinID:
XP_017641979
UniProt:
A0ABR0R6V6
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Position
1:1724637..1732064
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AA seq
1386 aa
AA seq
DB search
MASNPPFQVEDHTDEDFFDKLVDDDDDDSMGPTVPKFTESIDSDDTKGFSNLSMGEDSGD
EEVDSHAVKEKDPVDTGPALANVPVVNEPNDSLGFDNSVVETTDHLLEGELSEAGFNQDL
GENVGSKNSGVKEVGWNSLFADSNENGVHGFGHYSDFFSDLGENPTGAFPSEAGEIAKTS
FVDHNSASTYQQYHDGSHDQVYEASAANNGNEQDLYSIDYWEKMYPGWKYDANSGQWYHV
DSSVGDGSWNTDVKVQQTVQSFAGTMTTIERGATENVADWNQVSQVNNGYPEHMIFDPQY
PGYYYDLIAQQWFALDSYNASVQSTVQDDGQQNQNGFASTVQNSQTDTSSMYGEHGQGDN
YGSLGLGSPGGHHNWSDSYGTYKSQGFNMWQPGTAANSGALSSFDVNKQSDTSFGLNMPV
NNNASNFQSSYNSLQEAQSVNSANQVHTEANGVTGLQSFLPSENFNNQFIQTNLKQNEQV
NFSNDFYGSQKSVNVAQQALQSSQPFPYASNTGRSSAGRPPHALVSFGFGGKLIIMKDSS
PLQNSSFVTQDSVGASISVLNILEVVNSNTSVSAAAPAACDYFNTLCQQSFPGPLVGGNV
SNKDLSKWIDDRIASCESPNMDYGKGENMRMLLSLLKIACQHYGKLRSPFGSDTLLKETD
TPESAVAKLFASAKRKDASYGALSHCLQLLPSEGHVRATAIEVQNLLVSGRKKEALQHAQ
EGQLWGPALVLASQLGEQFYIDTIKQMALHQLVAGSPLRTLCLLIAGQPADVFSTGSTID
GMDLSQQHAEVRTNLMLDDWEENLAVITANRTKDDELVIIHLGDCLWKERSEITAAHVCY
LVAEANFESYSGSARLCLIGADHWKFPRTYASPEAIQRTELYEYSKVLGNSQFVLLPFQP
YKLIYAHMLAEVGKVSDSLKYCQAVVKSLKTSRVPEVETWKHLVLSLEERIRIHQQGGYA
TNLAPVKLVGKLLNFFDSTAHRVVGGLPPPPTSASNGNSQVNDHFNQQTGPRVSASQSTM
AMSSLMPSSSMEPINDWAGRGADGKMTMHNRSVSEPDIGRTTRQVDSSKETGPSNEQGKQ
SVSAGASRFSRFSFGSRLFQKTFGLVLRPRPDKQAKLGEKNKFYYDEKLKRWVEEGAEPL
AEEPALPPPPTTASFQNGTSDYNLNSTLKGESSPPNGSPKFRNPTPIEHASGIPPIPTSS
NQFSARGRMGVRARYVDTFNKGSGGQVNLFQSPAVSSVKPAAAANAKFFIPMPISTTMSE
QSMEAITENAQEENATNNNPSTPTSTSSVNDFCQSPRTLPAVTRPRFPSMDNIPQEVITT
NTNAYPSPHSRRTVSWSGGNFDDPLSPPSKPEIRPSGEAPGKPPPSFMPGPANGSFGDEQ
LHEVEL
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaatcctccattccaggtggaggatcacacggatgaagatttttttgataag
ttagttgatgatgatgatgatgacagtatgggtcccaccgttcctaaattcacggagagt
atcgattccgatgatactaaaggcttttccaatttatcaatgggagaagattccggtgat
gaagaggttgatagtcatgctgtaaaggaaaaagatcctgtggatacaggtccagcactg
gccaatgtacccgtagttaatgagccaaatgattcattggggtttgataatagtgtggtc
gaaacgactgatcatctcctagaaggagaactgtcggaggctggattcaatcaggattta
ggtgagaatgttggatctaagaattctggggttaaggaagtaggatggaattcacttttt
gctgattctaacgagaatggggtgcatgggttcggtcattattccgattttttcagtgat
ttaggggagaatcccacaggggctttcccatctgaagcaggtgaaattgcaaaaacgagt
tttgtagatcataattcagctagtacttaccagcagtatcatgatggcagccatgatcaa
gtttatgaagcttctgctgcaaataatggaaatgagcaagatttgtatagcattgactat
tgggagaaaatgtatccagggtggaagtatgatgcaaattctgggcagtggtatcacgtg
gacagttcagttggtgatggcagttggaacacagatgtgaaagtgcaacagacggttcag
tcttttgcggggactatgacaaccatagagcgtggtgccacggagaatgtggcagactgg
aatcaggtttcacaagtgaataatggttatccagaacatatgatttttgaccctcaatac
cctggttattactacgacttaattgctcaacagtggtttgcacttgacagctataatgcc
tctgttcagtcaactgttcaagatgatggtcagcaaaatcaaaatggatttgcttctact
gttcagaattctcaaactgatacttctagtatgtatggtgaacatggacaaggtgataat
tatgggtcactaggccttggaagccctggtggacatcataattggagtgactcctatggt
acttataaaagtcaaggtttcaatatgtggcagcctgggactgctgccaatagtggggca
ctttcaagctttgatgtgaacaagcaatcagatacatcttttggtttgaatatgcctgtg
aacaacaatgcaagtaacttccagtcatcctataattctctgcaggaagctcagtctgtc
aatagtgctaatcaggttcatactgaggccaatggggttactgggttgcaaagctttctt
cctagtgaaaacttcaacaaccagtttatccagacaaatttaaagcaaaatgagcaagtg
aatttctcaaatgatttctatggaagccaaaaatctgttaatgttgcccagcaggcactt
cagagtagccagccatttccttatgcttccaacacagggagatcatctgctggccgtcct
ccacatgcacttgttagttttgggtttggtggaaaactcattataatgaaggatagtagt
cctctgcaaaactcgtcatttgttacccaggattctgtgggagcctctatttctgttctc
aatattttggaagttgtcaattcaaacacaagtgtttccgctgctgcaccagcagcctgt
gattattttaatactctgtgccaacaatccttccctggtccattggttggtggaaatgta
agcaataaagacttgagcaaatggattgatgaccgaattgccagctgtgaatcacctaac
atggactacggaaaaggtgaaaatatgagaatgcttctctcattgcttaaaatagcttgt
cagcattatggaaaacttcggtctcctttcggctctgacactctattgaaggagactgat
actccagaatcagcagttgctaaactctttgcatctgcaaagaggaaggacgcatcttat
ggtgctcttagccactgcttgcagctattgccttctgaaggacatgttcgggcaactgca
attgaggtgcagaatcttctggtttctggtagaaagaaagaggctctacagcatgcacaa
gagggtcagttgtggggacctgcacttgttctcgcgtcgcaacttggtgaacagttctac
attgatactattaagcaaatggcacttcatcagctggtagcagggtctcctttacggaca
ttatgcctgctaattgcagggcaaccggcagatgttttttccacaggctccacaattgat
ggcatggatttgtctcaacagcatgcagaggtaaggactaatttaatgcttgatgattgg
gaagagaatttggccgtaataactgcaaatagaaccaaagatgatgagcttgtaattatc
catcttggagattgcctgtggaaggaaaggagtgagataacggcagcacacgtctgttat
ttagttgcggaagcaaactttgagtcatattcaggtagtgctagactttgtcttattgga
gcagaccactggaagtttccccgaacctatgctagtccagaggctatccagaggactgag
ttatatgaatattcaaaggtgctggggaactctcagtttgtcttgctaccatttcagcca
tacaaacttatttatgcgcacatgctggctgaagttggaaaagtttcagattcattaaag
tactgtcaagccgtagtaaaatctctgaaaactagtcgagtgcctgaggtagaaacttgg
aaacatttagttttatctcttgaagagaggataaggatccatcaacaggggggatatgct
acgaacttggctccagtaaaattagttggtaagttgctaaacttttttgatagcactgcg
catcgagttgtggggggtctaccaccacctcctacatcagcatcaaatggaaattcccaa
gttaatgaccatttcaaccaacaaaccgggccaagagtctcagctagccaatcaacaatg
gctatgtcatctttgatgccctcatcttcaatggaacctataaatgattgggcgggtagg
ggggctgatggtaaaatgacaatgcataatagaagcgtttcagagccagacattggcaga
acaacaagacaggttgattcatcaaaggaaacaggaccatccaatgaacaaggcaaacaa
tcagtctcagcaggggcatctcgcttttctcgttttagttttggctcacggcttttccag
aaaacttttgggttagtcttaagacctcgccctgataaacaggctaagctaggtgaaaag
aacaaattctactatgatgaaaaacttaagagatgggtggaggaaggtgctgaacctctg
gccgaagaaccagccttgccaccacctccaaccactgcttcattccagaatggaacatct
gattacaacttgaactctacattgaaaggtgaaagttcgccgcctaatggaagcccaaaa
ttccgaaatccaaccccaatagaacatgcttccgggatccctcccattcctacaagctcc
aatcaattctcagctcgtggacggatgggtgttcgagcaaggtatgtggacactttcaac
aaaggaagtggtggccaagtgaatttatttcagtcacctgctgtttcctccgttaaacct
gctgcagccgcaaatgcaaagttctttattcccatgcccatatcaacaacaatgagcgaa
caatcaatggaggcaattactgaaaatgcacaagaagagaatgctactaacaataatccc
agcactcccacttctacttctagtgtcaatgacttttgtcaatctcccagaactctgccg
gcagtgactaggccaaggttcccaagcatggataacattcctcaagaagtcattacaaca
aataccaatgcctatccatcaccacactcacgaagaacagtctcgtggagtggaggcaac
tttgatgatccattaagtcctcctagtaaacccgaaataagaccttcaggagaagcaccg
ggaaaacctccaccatcgttcatgcctggtccagctaatggtagttttggagatgaacaa
ctacatgaggtggaactttga
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