Gossypium arboreum (tree cotton): 108483253
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Entry
108483253 CDS
T05776
Name
(RefSeq) prolycopene isomerase, chloroplastic
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00906
Carotenoid biosynthesis
gab01100
Metabolic pathways
gab01110
Biosynthesis of secondary metabolites
Module
gab_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
108483253
Enzymes [BR:
gab01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
108483253
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GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
GIDA
Thi4
HI0933_like
Pyr_redox_2
GDI
FAD_binding_3
GMC_oxred_N
MCRA
Motif
Other DBs
NCBI-GeneID:
108483253
NCBI-ProteinID:
XP_017642031
UniProt:
A0A0B0MZT1
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Position
1:75303842..75308232
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AA seq
597 aa
AA seq
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MSLGCYQTILFPTKGKSGFSSWNPLKNSQLKGNKISGVEFSNFHVIQRRKGIPMRLKSLL
SVDSAVEIEGKEGVNTGSKYDAIVIGSGIGGLVAATQLAVKGAKVLVLEKYVIPGGSSGY
YQRDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGREMEVIPDPTTVHFHLPNNLSVQVH
REYSEFINELISKFPHEKEGILKFYGECWKIFNALNSLQLKSLEEPIYLFGQFFQKPLEC
LTLAYYLPQNAGDIARKYVKDPDLLSFIDAECFIVSTVNALRTPMINAGMVLCDRHFGGI
NYPVGGVGGIAKSLAEGLIDQGSEILYKANVTNIIIDQGKAVGVKISDGREFFAQTTISN
ATRWDTFGKLLKAENLPKEEENFQKVYVKAPSFLSIHMGVKAGVLPPDTDCHHFVLEDDW
TRLEEPYGSIFLSIPTVLDSSLAPKGRHILHIFTTSPLEDWAGLPPKDYEVKKELIADEI
IGRLEKKLFPGLKSSIVFKEVGTPKTHRRYLARDMGTYGPMPRQIPKGLLGMPFNTTGIS
GLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADIGLEKKSPILDAALLGLLGWLRTLA
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaggttgttatcaaaccattctgttccctacaaaagggaagtcgggtttttcg
tcctggaatccattgaaaaactcacaattgaaaggtaacaagattagtggtgtcgaattc
agcaactttcacgtcattcaaaggagaaaaggcattcctatgagattgaaatccctgttg
agtgtagacagtgcggtggagatagagggaaaggaaggagtcaatacggggagtaaatat
gatgcaatagttatagggtcagggataggagggcttgttgcagctacacagttggctgtt
aaaggagccaaggttttggtactggagaagtatgtgattcctggagggagttctgggtat
taccagagagatggatatactttcgatgtaggatcttctgtcatgtttggattcagtgat
aaggggaatctgaatttgataactcaagcattggctgcagtcgggcgtgagatggaggtg
attcctgatccaactacagttcatttccatctaccgaataacctttccgttcaagtacat
agagaatacagtgaatttatcaatgaacttattagtaaatttccacatgagaaggaaggg
atccttaaattttatggcgagtgttggaagatcttcaatgccttgaactcgttgcaattg
aagtccctcgaggaaccaatctacctttttggacagttctttcagaagcctcttgaatgt
ttgacacttgcttattatttgccccaaaatgctggagatattgctcgaaagtacgtgaag
gatcctgatttgttgtctttcattgatgctgagtgtttcatagtgagtacagttaatgct
ttgcggacaccaatgatcaatgcaggcatggttctatgtgacaggcatttcggtggaatt
aattaccctgttggtggtgttggtggaatagcaaagtctttggccgaaggcctgatcgat
cagggtagtgaaatactttacaaggcaaatgtgactaacattataattgaccaagggaaa
gctgtgggggtgaaaatttcggatggaagggagttctttgctcaaaccacaatatcaaat
gctactcgatgggatacatttgggaagctgttaaaagcagaaaaccttccaaaagaagaa
gaaaattttcagaaagtttatgttaaggctccatcatttctttcgattcacatgggtgtt
aaggctggcgttctgcctcctgatactgattgtcatcattttgtgctcgaggatgactgg
acgagattagaggaaccatatgggagcatcttcttaagcattccaaccgttcttgattca
tcattggctccaaaagggcgtcatattcttcacatatttactacttctcctttagaagat
tgggcagggcttccaccaaaggactatgaggtgaaaaaggagctaatagctgatgaaatc
atcggaaggttggagaagaaactattcccgggactgaaatcatccattgtttttaaggag
gtagggaccccaaagacacacagacggtacttggctcgtgacatgggtacttatggaccg
atgcctcgtcaaattcccaagggcttattagggatgccgtttaatacaacgggtattagt
ggtctttattgtgtcggtgatagctgctttccgggacaaggcgttatagcagttgctttt
tcaggcgtaatgtgtgctcaccgggttgctgctgatattgggcttgagaagaagtctcca
atattggacgctgctcttcttggattacttggttggttaaggacattggcttaa
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