Gossypium arboreum (tree cotton): 108483287
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Entry
108483287 CDS
T05776
Name
(RefSeq) ABC transporter E family member 2
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gab03009
]
108483287
Ribosome biogenesis [BR:
gab03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
108483287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
SMC_N
AAA_21
Fer4
AAA_15
AAA_22
Fer4_6
AAA
RsgA_GTPase
AAA_29
AAA_23
Rad17
NACHT
AAA_16
Fer4_2
NPHP3_N
Fer4_21
TsaE
nSTAND3
SRP54
Fer4_10
AAA_5
AAA_33
ORC-CDC6-like
Fer4_4
AAA_24
Fer4_9
Fer4_16
AAA_7
AAA_19
Fer4_7
Fer4_17
DLIC
Motif
Other DBs
NCBI-GeneID:
108483287
NCBI-ProteinID:
XP_017642078
LinkDB
All DBs
Position
8:complement(18220918..18226685)
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AA seq
605 aa
AA seq
DB search
MADRLTRIAIVSSDRCKPKKCRQECKKSCPVVKTGKLCIEVTPASKIAFISEELCIGCGI
CVKKCPFEAIQIINLPRDLDKDTTHRYGPNTFKLHRLPVPRPGQVLGLVGTNGIGKSTAL
KVLAGKLKPNLGRFNNPPDWQEILTYFRGSELQNYFTRILEDNLKAIIKPQYVDHIPKAV
QGNVGQVLDQKDEREMKAELCADLELNQVIDRNVGDLSGGELQRFAIAVVAIQNAEIYMF
DEPSSYLDVKQRLKAAQVIRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGVVT
LPFSVREGINIFLAGFVPTENLRFRDESLTFKVAETPQESAEEIETYARYKYPTMTKTQG
NFKLKVMEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDNVEGSDVEIPEFNVSYKPQ
KISPKFQSTVRHLLHQKIRDSYMHPQFVSDVMKPLLIEQLMDQEVVNLSGGELQRVALCL
CLGKPADIYLIDEPSAYLDSEQRIVASKVIKRFILHAKKTAFVVEHDFIMATYLADRVIV
YEGKPSVDCIANAPQSLLTGMNLFLSHLDITFRRDPTNYRPRINKLDSTKDREQKSAGSY
YYLDD
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcgcttgacgcgtatcgcgattgtcagctccgaccgctgcaagcccaagaag
tgccgtcaggaatgcaagaagagctgtcctgttgttaaaactgggaaactttgcattgag
gttacccctgcctcaaagattgctttcatctctgaggagttgtgcattggttgtggtatc
tgtgtcaagaaatgcccatttgaagcaattcaaatcatcaacttaccaagggatttggat
aaagatacaacccatagatatggccccaatacttttaaactacacaggttaccagttcca
aggcctgggcaagttcttggtctggttggaaccaatggcattggaaaatcaactgctctt
aaagttttggctgggaagctaaagccaaacttgggtcgtttcaataatcctccagattgg
caggaaatcttgacctactttcgaggatctgagttgcagaactattttacccgcatcttg
gaggataatctcaaggccatcatcaagccacagtatgttgatcatattccaaaggcagtc
caaggcaatgtgggacaggtgcttgaccaaaaagatgagagagagatgaaggccgaactc
tgtgctgatcttgaactaaaccaggtcatagatcgtaatgttggggatttatcaggtggg
gagctccagagatttgctattgctgttgtcgccatacagaatgctgagatttatatgttt
gatgagccttcaagttaccttgatgttaaacagagattgaaagcagcacaggtcattcga
tctctgctcaggcctaatagctatgttattgtggttgagcatgatcttagtgtcctggat
tacttgtcggatttcatttgctgcttgtatggaaaaccgggtgcatatggagtcgtaacc
cttcccttctctgtaagagagggaatcaatatcttcttggctggatttgtacctactgaa
aatctaaggtttcgagatgaatcgttaaccttcaaggtagctgagaccccacaggaaagt
gctgaagaaattgaaacctatgcacgatacaaatacccaaccatgactaaaactcagggc
aattttaaacttaaagttatggagggtgaatttactgattctcagattattgtaatgctg
ggtgagaatggtactgggaagaccacatttattcgtatgctggctggtttgttgaaacct
gataacgtagaaggttcagatgtggagatacctgagtttaatgtttcatacaaacctcaa
aagatcagtcccaaatttcaatctactgtccggcacttgctgcatcaaaagatacgtgat
tcatacatgcacccccagtttgtttcagatgtgatgaagcctcttctgattgagcaatta
atggatcaggaagtggttaatctctctggaggagagctgcaaagagttgcattatgctta
tgtcttggaaagccagcagatatttatctgatagatgaaccaagtgcttatcttgactcc
gagcagcgtattgttgcttctaaagtcataaagaggtttatcctccatgcaaagaaaact
gcgtttgtggtcgagcatgattttataatggcgacttacctcgcagatagagttattgtc
tacgaggggaagccttcagtggattgtattgcaaacgctcctcagtccttgttaactggc
atgaatctgttcctatctcatctggacatcacttttaggcgggacccaaccaattaccga
ccgagaatcaacaaactggactcaaccaaggatagagagcaaaagtctgctgggtcatat
tattacctagatgattga
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