Gossypium arboreum (tree cotton): 108483310
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Entry
108483310 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108483310 isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108483310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gab03036
]
108483310
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
108483310
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
108483310
NCBI-ProteinID:
XP_017642122
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Position
8:complement(142130865..142136347)
Genome browser
AA seq
1347 aa
AA seq
DB search
MMAIEKNNFKVSRIDSEFSSASRDATSSTDEDELQRPSSAINSDGAGDDDDEDDDDDEFD
DADSGAGSDDFDLLELGEMGAEFCQVGNATCSVPFDLYDLPGLEDILSLDVWNECLSDEE
RFSLTKFLPDMDQDTFMWTLNDLLKGNNFHFGSPSKKLFDILKGGLCEPRVALYREGLNF
FQKRRHYHHLRMHQNNMVAKLCQTRDAWLNCRGYSIEERLRVLNIMRSQKILMYEKLEDE
DSESSERGDFGEGLWSRRVKDQKALQKKGHHGVDPTLESVSRGQMVGLEPSEYRKQNPKG
ILKARGSKFPSAKEFGGGVYPGLDIDTEPYGLHGTLPRQKYKSGAANRTRDQMRLDDDGE
DPMFGISIQQDRHAVHDSKSRKSGLLRAGKTYGLLRGEELAGDSFMALPPSSKHDLRAYG
RNRDVNQFPDAKVYTSKPPNMRTPYDFAKKSKYSENHQQFAVGNQIKLMKGRTPQLPLKG
SRFDLSERTELFWQNKNQGEDFSVDSSVRSDDWNIRSRKCKMGPECPDKASSQQMNDRFL
FSDNRIKSSQEKIRGNHVQNGGPVMAVSKGSRAFLKNEETESDSSEQFDDDDDSNPLMRS
KFDYPSGVIEGSRLSSLKSGLDSRKIKSSKKDTMEDGWPLDGINRISEKSFGENVHVPGV
ESYYFKGKQKSKMHEISPLQNSASRAFGKVDRKKVSKLNKSGQLGEKLGDRLKMSSTKAY
PTEKRLKGEVVYDHPMSQRDYLLNYPVDEEDASPVTLPLADENNRCRTGKKGRSIETYDC
GEKPEASLLGCKTGKEYVGDVDRRGEDGNLQSNLQKRTDDSLSLKKKGKRKLEVDAVTSD
MEALEPHGAEVQVTDVEMEIKPQKKPFTLITPTVHTGFSFSIIHLLSAVRMAMITPLLED
SLEVGRPRREQNGKQEGGVNGVLEGGVNGVLSCENTATDPDQPVQRSIPSLTVQEIVNRV
TVNPGDPCILETQEPLQDLVRGVLKIFSSKTAPLGAKGWKALVAYEKSTKSWYWVGPIMH
SSNDHETIEEVTSPEAWSLPHKMLVKLVDSFANWLKKGQETLQQIGSLPAPPLELMQVNL
DEKERFRDLRAQKSLNTISPSSEEVRAYFRREELLRYSIPDRAFSYTAADGKKSIVAPLR
RGGGKPTSKARDHFMLKRDRPPHVTILCLVRDAASRLPGSIGTRADVCTLIRDSQYIVEE
VSDAQVNQIVSGALDRLHYERDPCVQFDGERKLWVYLHREREEEDFEDDGTSSTKKWKRQ
KKDTAEQSDQGAVIAAFHAAGDQLGFDDDKKMETECEDRQNPEDNADDSHASEQGHPITW
DPLDANLVQEDKLLCQENSTNEEFDDN
NT seq
4044 nt
NT seq
+upstream
nt +downstream
nt
atgatggcaattgagaagaacaactttaaagtttcgcggattgattcggagttttcttct
gctagtagggatgccacttcgtcaactgatgaggatgagcttcaacgtccaagctcagct
attaattctgatggtgctggtgatgatgatgatgaagacgatgatgatgatgaatttgat
gatgctgattcaggagcaggttcagatgactttgatttattggaattaggtgaaatgggg
gctgaattttgccaagttgggaacgcgacttgttccgtaccttttgatttatatgatctg
cccgggttggaagatattttgtctcttgatgtctggaatgagtgtttaagtgatgaagag
aggtttagcctgactaagtttttacctgatatggaccaggatacatttatgtggaccttg
aatgaccttcttaagggtaataattttcattttgggagtcctagtaagaagttgtttgat
atattgaaaggagggttgtgtgagccaagggttgccctttatcgggagggtttgaatttc
tttcaaaagcggcggcattaccatcatttgaggatgcatcagaataatatggttgctaaa
ctttgtcaaacaagggatgcttggcttaattgtaggggatacagtattgaggagcggctt
cgtgttttgaatattatgagaagtcaaaagattttgatgtatgaaaaattggaagatgag
gattctgaatcctccgaaagaggtgactttggtgaagggctgtggagcagaagggttaag
gaccaaaaagctttgcagaaaaagggtcaccatggggttgatcctactttagaatccgtt
tcacgagggcagatggtgggtttggaaccatcagagtacaggaagcagaatccaaaaggt
atactgaaggcacgtggatcaaaatttccttctgcaaaggagtttggtggtggtgtttat
ccaggtttggatattgatactgagccatatggtttgcatggaacccttcctcgacagaaa
tataagtcaggggcagcaaacaggacaagggatcagatgaggttagacgatgatggtgaa
gacccaatgtttggaattagtattcaacaggaccgacatgctgtgcatgatagcaaatca
cgcaaatctggtttgttgagagcagggaagacgtatggccttttaagaggggaagaatta
gctggtgacagtttcatggctttgcctccgtcttcaaagcatgatttgcgagcctatggt
aggaacagggatgtgaatcaatttcctgatgcaaaagtatacacgtcaaagccaccaaac
atgagaacaccctatgattttgccaaaaagtccaagtattctgaaaatcatcagcaattt
gctgttggaaatcagataaagcttatgaaaggcagaactccacaattgccactgaaaggg
agtcgatttgacttgtcggaacgcaccgaactgttttggcaaaataagaaccaaggggaa
gatttttctgtggattcttcagttagatctgatgattggaatattaggagcaggaaatgt
aaaatggggccagagtgtcctgataaagcttcctcacaacagatgaatgaccgattcttg
ttttctgataatcgaattaaatcatcacaagaaaagatcagagggaaccacgtgcaaaat
ggaggaccagtaatggctgtttcaaaaggtagtagagcattccttaaaaatgaagaaaca
gaatctgactcatctgaacagtttgatgacgacgatgatagcaatcctctaatgagaagc
aagtttgattacccaagtggtgtcattgaaggttcacggctgtcttcattgaagtctggc
cttgattctagaaagataaaatcttcaaagaaagatactatggaggatggatggcctctt
gatggaatcaatcgcatctctgaaaagagctttggggaaaatgtgcacgtgccaggagta
gaaagctactattttaaaggaaaacagaagtctaagatgcacgaaataagtcccttgcag
aactctgcttctagagcttttggcaaggttgataggaaaaaggtatccaagttgaacaaa
tctggccaattaggagagaaacttggtgacagattaaagatgtcctcaacaaaggcctac
cctactgagaaaaggctgaaaggtgaagttgtctatgatcatcctatgtctcaacgagat
tatctgcttaattatcctgttgatgaggaggatgcttcacctgtgacactaccattggca
gatgaaaataacaggtgtagaactgggaaaaaaggccggagcattgaaacatatgattgt
ggtgaaaaacctgaagcttcattgcttgggtgcaagacagggaaggagtatgtgggagat
gtcgacagaagaggtgaagatggtaacctgcagtctaaccttcagaagcgaactgatgat
tccctttccttgaaaaaaaagggaaaacggaaattggaggttgatgctgttacctcagat
atggaagctttggaaccacatggtgcagaagtgcaagttacagatgttgagatggaaatc
aaaccacagaaaaagccgtttactctgattacccctacagttcatactggtttctcattt
tcgattatacatcttctttctgctgttcgcatggcaatgatcactccacttctagaagat
tccttagaggttggcagacctcgcagggagcagaatggaaagcaggaaggtggtgtgaat
ggtgttcttgaaggtggtgtgaatggtgttctttcttgtgagaacacagctactgatccg
gatcagcctgtgcaaagaagtataccttctcttactgttcaagagattgttaatcgtgta
acagtgaatccgggagatccatgtatccttgagacacaagagccgcttcaagatttagtt
cggggagttctgaaaattttctcatcaaaaacagcacctttgggggcaaaaggttggaag
gcacttgttgcctatgaaaagtccacaaaaagttggtattgggttggtccaattatgcat
agctcaaatgatcatgaaacaattgaggaggtgacgtcacccgaagcctggagtcttcct
cacaaaatgcttgtcaagctggttgattcttttgcaaattggctaaaaaagggtcaagag
actctccaacaaatagggagtcttcctgcaccaccgcttgaattgatgcaagtaaattta
gatgagaaagaaaggttcagagacctaagagcacagaaaagccttaataccattagccca
agttccgaagaagtgagagcttatttccgtagagaggagcttcttaggtattctattcct
gacagggccttctcttacacagctgctgatggcaaaaaatcaatagttgctcctttgaga
aggggtggaggtaaaccgacttcaaaggctcgagatcattttatgctgaaacgtgatagg
ccaccacatgttacaattctttgtcttgtgagagatgctgcttccagattgcccggaagt
attggcacccgtgcagatgtttgtactttgataagagactctcaatacattgttgaagaa
gtttctgatgcacaagttaaccagattgttagtggggctttagaccgtttacattatgaa
cgtgatccttgtgtacaattcgacggagaaaggaaattgtgggtttatttacacagagaa
agagaagaagaagactttgaggatgatggtacttcatctactaagaaatggaagaggcag
aaaaaggatactgctgaacaatctgatcaaggagctgtaattgcggcttttcatgcagcc
ggggatcagttgggatttgatgatgataaaaagatggagacagagtgtgaggatagacaa
aatccagaggataatgctgacgacagtcatgcatcggaacaaggtcatccaataacatgg
gatcctcttgacgcaaatcttgtccaggaagacaaattgctatgtcaagaaaattctaca
aacgaagaatttgatgataattga
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