Gossypium arboreum (tree cotton): 108483327
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Entry
108483327 CDS
T05776
Name
(RefSeq) AP-4 complex subunit epsilon-like
KO
K12400
AP-4 complex subunit epsilon-1
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
108483327
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108483327
Membrane trafficking [BR:
gab04131
]
Endosome - Golgi transport
Others
AP-4 complex
108483327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
HEAT
HEAT_2
INTS1_R4
HEAT_EZ
TOR1L1_N
PDS5
NPHI_C
V-ATPase_H_C
Motif
Other DBs
NCBI-GeneID:
108483327
NCBI-ProteinID:
XP_017642153
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All DBs
Position
8:complement(18551162..18559546)
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AA seq
956 aa
AA seq
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MGSQGGFYQSKEFLDLVKSIGEARSKAEEDRIVLSEIETLKRRISEPDTPKRKMKEYIIR
LVYVEMLGHDASFGYIHAVKMTHDDSLLVKRTGYLAVTLFLNEDHDLIILIVNTIQKDLK
SDNYLVVCVALNAVCKLINEETIPAVLPQIVELLAHPKEAVRKKAIMALHRFYQKSPSSV
SHLVSNFRKRLCDNDPGVMGATLCPLFDLITNDVNSYKDLVISFVSILKQVAERRLPKAY
DYHQMPAPFIQIKLLKILALLGSGDKQASEIMYTVVGDIFRKCDSSSNIGNAVLYECICC
VSSIYPNPKLLASAADAISRFLKSDSHNLKYMGIDALGRLIKISPEIAEQHQLAVIDCLE
DPDDTLKRKTFELLYKMTKSTNVEVIVDRMIDYMISINDNHYKTEIASRCVELAEQFAPS
NQWFIQTMNKVFEHAGDLVNIKVAHNLMRLIAEGFGEDDNTADSQLRSSAVESYLYILGE
PKLPSVFLQVICWVLGEYGTADGKYSASYITGKLCDVAEAYSNDETVKAYAVTALMKIYA
FEIAAGRMVDMLPECHSLMEEFLASHSTDLQHRAYELQAVIGLDAHAVESIMPSDASCED
IEVDKALSFLNGYIQESIEKGAQPYIPESERSGMLNISNFRNQDHHEASSHGLRFEAYEL
PKQTVQARIPPASLASTELVPVPEPVYPRESYQTTTVPSVSSDAASTELKLRLDGVQKKW
GRQTHFPSTSTSNSTSQKTVNGITQVDGSNTANSRTRETYDSGKQVEISPEKQKLAASLF
GGPSKTEKKSATGHKSSKPSSHMVKSHAPKSSMEVASEKTSPVQQPPDLLDFGEPTVKST
APSPDPFKDLEGLLEPTTQVSSAVNHSSTAAVTKPPDIMGLYTETPAGAHHKDSDILSGL
SNSPMTNMVGGTTTMQVAQSSKSPNLKDSLEKDALVRQMGVTPSSQNPNLFKDLLG
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgggctcccagggcggattctaccaatccaaagaatttctggatctggtgaagtccatt
ggcgaggctcgatccaaggccgaagaggaccgaattgttctcagcgagatcgagactctc
aaacgccgcatctccgagcccgacacacccaagcgcaagatgaaagagtacatcatcaga
ttggtttacgtcgagatgctcggtcacgacgcttccttcggttacattcacgccgttaag
atgactcacgatgatagcctcctcgtcaaacggaccggttacttggccgttacgctcttc
ttaaacgaagatcatgatttgatcattttgattgtcaataccatccagaaagatttgaag
tctgacaattacttggtggtctgcgtcgccttgaatgccgtttgcaagttgatcaatgag
gagacaattcctgccgtcttgccgcagattgtggagttgctcgcacatcctaaggaggct
gtacggaagaaggccatcatggctctccatcggttttatcagaaatccccttcttctgtt
tcgcatctcgtctccaattttcgcaagagactttgtgataatgatcctggagttatgggt
gcaaccctttgcccactttttgatcttataacaaatgatgttaattcttacaaagatttg
gtcatcagctttgtaagcattcttaaacaagttgctgaacgcagactacctaaggcttat
gattaccatcagatgccagctccatttattcagatcaaattgttgaaaattctggcattg
cttggaagcggtgacaagcaagcaagtgaaataatgtataccgtagtgggagacatattc
agaaaatgtgattcatcaagtaatataggaaatgctgtactctatgagtgcatatgctgt
gtttcctctatatatcccaatcccaagttattagcgtctgcagcggatgctatatccaga
tttttaaagagtgacagtcataacctaaaatacatgggcattgatgctcttggccgatta
ataaagataagtccagagattgctgagcaacatcagttggctgttattgattgcttagag
gacccagatgatactctgaagagaaaaacctttgaactactgtacaaaatgaccaagtct
acaaatgtggaggttattgttgatcgcatgattgattacatgattagcattaatgacaat
cattataaaactgaaatagcatctcgatgcgttgaacttgcggagcaatttgcaccgagc
aatcaatggttcattcagaccatgaataaagtttttgagcatgcgggagatctggtcaat
attaaggtagctcacaatttgatgcggttgattgctgagggatttggagaggatgataat
actgcagacagtcaactgagatcatctgctgtggagtcatacttgtacattcttggtgaa
ccaaagctgccatccgtttttcttcaagtaatttgctgggtcttaggggaatatggaaca
gctgatggaaagtactctgcttcttatattactgggaagttatgtgatgtggcagaggca
tattcgaacgatgagactgttaaggcatatgcagttacagccctcatgaaaatatatgca
tttgaaatagcagcggggaggatggtagatatgctgcctgagtgtcattctttaatggaa
gaatttttggcttctcactcgacagatttgcagcatcgcgcttatgaattgcaagctgtg
attggccttgatgctcatgctgttgagagtattatgccatcagatgcaagttgtgaagat
attgaggttgataaagccctttccttccttaatggttatatccaagagtcaattgaaaaa
ggtgctcagccttatattcctgagagtgaacgctctggaatgttaaatatcagcaatttt
aggaatcaagatcaccatgaagcttcgtcacatggtctcaggtttgaggcatatgagctt
ccaaagcaaacagtgcaagcaaggattcctcctgcatcacttgcttcaactgaacttgtt
ccagtgccagagccagtgtatcctagggaaagctaccagactactactgtgccatctgta
tcatcagatgcagcatcaacagagctcaagctacgactagatggagtccaaaaaaagtgg
ggtaggcaaacacactttccctcaacatctacctcaaattccacatcccagaaaacagtt
aatggtatcacgcaagttgatgggtcaaatactgcaaattcaagaacacgtgaaacctat
gattctgggaaacaagtagaaatttctccagaaaagcagaaactggctgcttcgctgttt
ggaggtccatcaaaaacagaaaagaagtcagctactggtcataagagttcaaagccaagc
agccacatggtgaagtctcatgcgccgaagtctagtatggaagttgcttcagaaaagaca
tctcctgttcaacaacctccggacttgcttgattttggagaaccaactgtcaaaagtact
gctccttcaccagatccatttaaagatctggagggtcttcttgagccaacaactcaagtt
tcttcagcagtgaatcatagttcaactgctgctgttacgaagccccctgatataatggga
ttgtacacagagacacctgctggcgcacaccataaagacagtgatattttatctggcttg
tcaaattcgccaatgacaaatatggttggtggtactacaaccatgcaagtagctcaaagt
agtaagagccccaaccttaaagattcattggaaaaggatgcactggttaggcagatgggt
gttactccatcgagtcagaatccaaacttgtttaaagatctactcgggtga
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