Gossypium arboreum (tree cotton): 108483360
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Entry
108483360 CDS
T05776
Name
(RefSeq) ABC transporter F family member 1
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gab03009
]
108483360
Ribosome biogenesis [BR:
gab03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
108483360
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_23
MMR_HSR1
AAA_28
AAA_14
RsgA_GTPase
AAA_30
AAA_22
AAA_18
AAA_15
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
108483360
NCBI-ProteinID:
XP_017642201
UniProt:
A0ABR0R5Y9
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All DBs
Position
1:5446000..5449665
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AA seq
600 aa
AA seq
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MVSDASKKKAAQKKAAAAAKRGGKAAAAAASSKAAAAATAENGVDKVSDKVSMLQISDRT
CTGVLCSHPLSRDIRIESLSVTFHGHDLIVDSTLELNYGRRYGLLGLNGCGKSTLLTAIG
LRELPIPEHMDIYHLTREIEASDMSALQAVISCDEERLKLEKEAEILAAQDDGGGEALER
IYERLDALDASTAEKRAAEILFGLGFNKMMQAKKTRDFSGGWRMRIALARALFMNPTILL
LDEPTNHLDLEACVWLEENLKKFDRILVVISHSQDFLNGVCTNIIHMQNKKLKLYTGNYD
QYVQTRSELEENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGL
TEKVVRDKVLVFRFVDVGKLPPPVLQFVEVTFGYTPENLIYKNLDFGVDLDSRIALVGPN
GAGKSTLLKLMTGELTPIDGMVRRHNHLRIAQFHQHLAEKLDMEMSALQYMIREYPGNEE
EKMRGAIGKFGLSGKAQVMPMKNLSDGQRSRVIFAWLAFRQPHLLLLDEPTNHLDIETID
SLAEALNEWDGGLVLVSHDFRLINQVAEEIWVCENQAATRWEGDIMDFKQHLKSKAGLSD
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcggacgcgagcaagaagaaggctgctcagaagaaggctgctgccgctgcgaaa
agaggagggaaggctgctgcagccgctgcatcttccaaggcggcagctgcggcgaccgcg
gagaacggcgttgataaggtttctgataaagttagtatgctccagatatccgatcggacc
tgtaccggtgttctctgttcgcatcctctttcccgagatattcgtatagagtccttatca
gttactttccacggacatgatcttattgttgattcaacattggagcttaattatggcaga
cgctacggtttgctaggattaaatggttgtgggaaatccacgctgcttactgcaataggg
ttgcgtgaacttccaattccggagcacatggatatctatcacctgacgagggagattgaa
gcttcagatatgtctgcattgcaggctgtcataagttgtgatgaagagaggttgaagttg
gagaaagaggcagaaatcttggcagcacaggatgatggtggtggagaggcacttgaacgt
atttatgagcgattggatgccttagatgcatcaactgctgagaaacgtgctgctgaaatt
ttatttggactcggtttcaacaagatgatgcaggcaaagaaaacccgagatttctctggt
ggttggagaatgaggattgcattggcacgggctctattcatgaatcccaccattcttttg
cttgatgagccaaccaatcatttagatttagaagcttgtgtctggttggaagaaaatttg
aagaaatttgatcgtatccttgtggtgatatcacattcccaggatttcctgaacggagtt
tgtacgaacattatccacatgcaaaacaaaaaacttaagttgtacaccggcaattacgat
cagtatgttcaaactcgttctgaattggaagagaaccagatgaaacaatacaagtgggag
caggaacagattgcttcaatgaaggagtacattgctcgcttcggtcacgggtcagccaaa
ctagcccggcaggcacagagtaaggagaagacattggcaaagatggagcgaggtggactc
acggagaaggtagtcagggacaaggttctggtgtttcgatttgttgatgttggaaaactt
cctccaccggtactgcagtttgtggaagttactttcggatacacgcctgagaatctgatc
tacaagaacttggactttggggtagacttggactcaaggatagcattagtaggacctaat
ggtgcagggaagagtacactgctgaagctgatgacaggtgaattgactcctattgatgga
atggtccgacggcataaccatctgcgaattgcacaattccatcagcatttggcagagaaa
ctggatatggaaatgtcagctctccagtacatgataagagaataccctggaaatgaggaa
gagaagatgagaggtgcaattgggaagtttggattgtcagggaaagcgcaagtgatgcca
atgaagaacctatctgatggacagaggagtcgagtcatcttcgcgtggttagcatttcga
caaccccacttgctgctgctagatgagcccactaaccatttggatatcgagacgatcgat
tcactggcggaagcattgaacgagtgggatggtggattggtactggtgagtcacgatttc
cggctgataaaccaggtagccgaggagatatgggtgtgtgaaaatcaagctgcaacacga
tgggaaggggacatcatggacttcaagcagcatctcaagagtaaagctggtttatctgat
tga
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