Gossypium arboreum (tree cotton): 108483384
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Entry
108483384 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108483384 isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108483384
Membrane trafficking [BR:
gab04131
]
Protein recycling
Others
Retriever complex
108483384
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
108483384
NCBI-ProteinID:
XP_017642239
LinkDB
All DBs
Position
1:110226952..110237159
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AA seq
922 aa
AA seq
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MEFRPRNYVAEEQSHSLPRSRADIHPFSSSSPQSILRQVDDNEENRNNEEFFDPLRAPDS
NASVETVDGHDFESSSNGNDDSFPVQTKEWTSFKRFLMQRFPVSKMISVSSMSNTIVRSG
KAHEKSSSSTHLEELDDPQKFSETDTKVITQQEYVSRLHELKDEINRGWHSEDRVKSLKL
SIKVARLLMDTSVSNFYPTLFVLVTDVLNMLGDMVWERIRQKAEFAEDGARLCSLRAENF
RASDVPIDAKETCYNWFCKVGSIRELLPRIYLELAIFPCWRFLIEQPVESLQRLVMMTRG
IGDPLASAYCRLYIAHRAQKLPSHDTGYLITCLNDITRIFTRISSTKESAHGCFADSKRS
LVSLMEPSVEFIMKCILNDASQRRAGKVLVELGLGRSQEELFGGSPCVSIVLHHLLKELP
IDIVSFHAVDILHLIKCSNDNSYDQCLNYRLVGLRLSEQISQIGSVEAVVNEVIQVVSEY
GLDEYLKVVDAYLDIVLQNQMDGHLKTILEGISKLASDKVLAEDELASLQSILVKLLSHF
KDLEHVFSLNHFLQILDTMHGNSRGIVNMHILDMATRNGYVHDPTTIQLLFEISQALHSD
TDLVNMKNDDNQQQARLISRFVRMVDHGVEYERHLAFLMECRGALGSIVELKEILVHSSN
CLATKALKDGKKHTAFVKTCIAFSEITIPSIPGHIKQLNLYLGTAEVALLGGLVSHSDGL
IDSAINCLQSSDWMEGSRTLDSDGMLSSIRKLCSLLIMVPGNPEVGILHIPKSILLIIHS
RSWSPRLKARILCAIISLSATLSQERLPYHADHTEIMGNDLLFFGDSSYVCELLSLTESV
LQNLVDVIEQEPSRAARGSLSLEACNCIASSFKINEHVLSVCSKLIETAKLCLNAKDKYL
TSTISFLDKNLPAAAVSSSIAI
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggagttcagacctcgaaactacgtcgcagaagagcagtcccactcgcttcctcgatca
cgcgccgatatccaccctttctcttcctcctctcctcagtcaatcctccgccaggttgat
gataacgaggaaaatagaaacaacgaggagttctttgatccgcttagagcacctgattct
aatgcatcggttgaaactgtcgacggacacgattttgagagtagttctaatggaaacgac
gattctttcccagttcaaacaaaggagtggacctcttttaagagattcttaatgcagaga
tttcctgtttccaaaatgatttcagtttcttctatgtccaatacaatagtgagaagtgga
aaagcacatgagaaatcttcaagtagcacacatctggaagaactggatgatccacaaaaa
ttttcagagacggataccaaggttatcactcagcaggaatatgtatcacgattacatgaa
ctgaaagatgaaataaatcgtggttggcacagtgaagatcgtgtaaaatctttgaagtta
tctataaaggttgcaaggcttctaatggatacatcagtttcaaatttttatccaacattg
tttgtcctagttacggatgtactgaacatgcttggggacatggtatgggaacgcattagg
cagaaagctgaatttgctgaagatggagccagactttgctccttgagagcagagaatttt
agagcaagtgatgttcctattgatgccaaggaaacttgctataactggttttgcaaggtt
ggctccattcgagaacttcttccacgaatttatttggagctggctatcttcccttgttgg
cgttttctgattgagcaaccagtggagtctcttcagcgcttggtcatgatgactagaggg
ataggagatccgttagcatctgcctattgtcgcctgtatattgcccatcgtgcacagaag
ttgccctcacatgatacaggatatctaattacatgtcttaatgacatcacacgcatattt
acacggatatcatcaacaaaggaatctgcacatggatgtttcgctgacagtaagaggtca
cttgtcagtctgatggaaccatctgttgagtttattatgaaatgcatattaaatgatgca
tctcagaggagggcagggaaagtacttgttgagcttggactagggagaagtcaggaggaa
ttgtttggtggttccccatgtgtctcaattgtacttcatcatttactgaaggaacttcct
attgacattgttagctttcatgctgtggatatccttcatcttattaagtgcagcaatgat
aactcctatgatcagtgtttgaattataggttggttggactcaggctgtctgaacagata
tctcaaattggcagtgttgaggctgttgtcaatgaagttattcaggtggtttctgaatat
gggcttgatgagtacctgaaggttgtagatgcttatcttgatattgttcttcaaaatcag
atggatggccatctaaagactattctggaagggatctcaaagttggcatctgataaagtg
ttagctgaagatgaactagcaagtttgcaatccatcttggtgaagcttctttctcatttt
aaggacttggaacatgtgttttctttgaatcattttcttcagatcttagatacgatgcat
gggaactctcggggcattgtcaatatgcatatacttgatatggctacaaggaatggttat
gtacatgatccaacaaccatacagttactctttgaaatatcacaggctttacatagtgat
actgatcttgtaaacatgaaaaatgatgataaccaacagcaagcacggctgatttctcgt
tttgtccgaatggtagaccatggagtagagtatgaacggcatttagcatttcttatggaa
tgtcgtggggcccttggtagcattgttgaactcaaggaaattcttgttcattctagtaat
tgtttagctacaaaagctctaaaagatgggaaaaagcatactgcttttgtaaagacttgc
atagcatttagtgaaatcacaattccttctattccgggtcacattaagcaattaaatctt
tatcttggaacggctgaggttgcactgttaggtggtttagtttctcattctgatggactg
atagattcagcaatcaactgtttacagagttctgattggatggaaggctctcggacactt
gattctgatgggatgctttcctccattcgaaaattatgcagcctcttgattatggttcca
ggtaatcctgaagtaggaattttgcatattccaaagagtatattattgatcattcattcc
cggtcatggtctccaagactgaaggcaagaatattatgcgcaataatttctttatcagct
acactttctcaagaaaggctcccataccatgcagatcatacagagattatgggcaatgat
ttgttattttttggtgattcatcttatgtgtgtgaacttctctcattgacggaatctgtt
cttcaaaaccttgttgacgttattgaacaagagccttcccgggctgcccgtggaagcttg
tcacttgaagcttgtaactgcatagcatcatctttcaagataaacgaacatgtattatct
gtctgctcgaaactgattgaaactgccaaattgtgtttgaatgcgaaggacaagtatctc
acttccaccattagttttctggacaagaacttgcctgctgcagctgtctcatcgtctatt
gctatctga
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