Gossypium arboreum (tree cotton): 108483386
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Entry
108483386 CDS
T05776
Name
(RefSeq) cysteine--tRNA ligase 2, cytoplasmic
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108483386
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gab01007
]
108483386
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gab03016
]
108483386
Enzymes [BR:
gab01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
108483386
Amino acid related enzymes [BR:
gab01007
]
Aminoacyl-tRNA synthetase
Class I (G)
108483386
Transfer RNA biogenesis [BR:
gab03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108483386
Prokaryotic type
108483386
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1f
CysS_C
Tfb4
Motif
Other DBs
NCBI-GeneID:
108483386
NCBI-ProteinID:
XP_017642246
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All DBs
Position
12:115541068..115547164
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AA seq
546 aa
AA seq
DB search
MDPSKQETNQKKASKPMAKKETQEFQFVVYNTMTQQKEVFKPKIPGKVRMYVCGVTAYDF
SHLGHARAAVSFDVLYRYLKHLGYEVTYVRNFTDVDDKIIRRANETGEDPISLSDRYCKE
YNIDMSDLQCLSPTHEPRVSDHMEQIKDMITQIINKDFGYVVDGDVFFAVDKFPNYGKLS
GQKLENNRAGERVAVDSRKRNPSDFALWKAAKPGEPSWDSPWGPGRPGWHIECSAMSAHY
LSFKFDIHGGGLDLIFPHHENEIAQSCAACEESDVSYWMHNGHVTNNNEKMSKSLGNFFT
IRQITERYHPLALRYFLINAHYRSPLNYSVVQLEGASDAVFYIYQTLKDCQDALLQLQEE
MPNDGKPARISPDAKECISKLRNEFQVKMSDDLSTSLILTGAFLEALKLVNNLLTMLKKK
QQKQQRLLVIKSLKEIENEVTKVLDVLGLQPPWSYNEVLLQLKEKALTRAGLVEDDVIRL
INERAEVRRNKDFLKSDQMRAHLQAKGIALMDVGTETIWRPCVPVQQDSEIVPSEGRKVP
PKPESA
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggatccctcaaagcaagaaacaaaccaaaaaaaagcttctaaaccgatggctaagaag
gaaacccaagaattccaatttgttgtttacaataccatgactcagcaaaaagaggttttc
aagcccaaaatccctggaaaagttcgcatgtatgtctgcggtgtcactgcctatgatttc
agtcaccttggccatgctcgtgctgccgtttcctttgatgtcctttacaggtaccttaag
catttgggttatgaggttacttatgtcaggaattttactgatgttgatgataagataatt
cgtcgagccaatgagactggagaagatccaataagtttgagtgaccggtactgtaaagaa
tataatatagatatgagtgatctacagtgcctttctccaacacatgagccacgtgtttct
gatcacatggagcagatcaaagatatgataactcagattataaacaaagactttggatat
gttgttgatggcgatgtgttttttgctgttgataaattcccaaattatggcaagttatct
gggcagaagctggaaaacaatagagcaggtgaacgtgttgctgttgactcaaggaagcgt
aatccttccgactttgcattatggaaggctgcaaagccaggtgagccatcttgggacagc
ccttggggacctggacgacctgggtggcacatagaatgtagtgcaatgagtgcacattat
ttaagcttcaaatttgacattcatggtggtgggcttgatttgatttttcctcaccatgaa
aatgaaattgctcaaagttgtgctgcatgcgaagagagtgacgtaagttattggatgcac
aatgggcatgttactaataacaatgagaagatgtcaaaatctttgggtaactttttcaca
attcgccagattactgagagatatcatccactggctttgcgatacttcttgataaatgca
cactatcgttctcctctcaattactccgttgttcagttggaaggtgcatcagatgctgtt
ttttacatatatcagactttgaaagattgtcaagatgctctattgcaactacaagaagaa
atgcccaacgatggcaaaccagctcggattagtccggacgccaaggaatgcattagcaag
ctccgcaatgagttccaggtgaaaatgtcagatgacttgagcacttcacttatactgact
ggagcctttctagaagcattgaagttggtaaacaatttgttgaccatgctaaagaagaag
cagcaaaagcaacaaagattattggtaattaaatcccttaaagagattgagaacgaagtt
acaaaagttttggatgttcttggattgcagccaccttggtcttataacgaggttttgctg
caattaaaggagaaagcattgacgagagccgggttggtggaggatgatgtgattcgtcta
attaacgagcgagctgaagtgaggagaaacaaagacttcttgaaaagtgatcagatgaga
gctcatttgcaagcaaagggcattgcactcatggatgtaggcacggaaacaatttggaga
ccttgtgttcctgttcaacaagactcggaaatagtgccatcagagggccggaaggtccct
cccaagcctgaaagtgcataa
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