KEGG   Gossypium arboreum (tree cotton): 108483408
Entry
108483408         CDS       T05776                                 
Name
(RefSeq) uncharacterized protein LOC108483408
  KO
K24739  WD repeat-containing protein 13
Organism
gab  Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:gab00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:gab04990]
    108483408
Domain-containing proteins not elsewhere classified [BR:gab04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   108483408
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WD40_Prp19 WD40 Beta-prop_IFT140_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_EML WDR90_beta-prop_4th Beta-prop_HPS5 WD40_Gbeta Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_Vps41 Beta-prop_Aladin Beta-prop_ACSF4 CPSF_A Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_NUP159_NUP214 KNTC1_N Beta-prop_EMC1_N Beta-prop_RIG_1st Beta-prop_VPS8 WD40_RFWD3 WD40_like Beta-prop_NWD2_C
Other DBs
NCBI-GeneID: 108483408
NCBI-ProteinID: XP_017642276
LinkDB
Position
1:complement(123143625..123148994)
AA seq 503 aa
MAEVTSMNNCSKDGGAIEAVTKNDCTINGTGKDIIKVTVKKANVKDPEIFSCLLQPASSD
SDLDSIGVRRFLLARKAESGVHRRLDWRCNGKGYVAYRNYIRRPRNWENSQIPSYPSTPG
NSGQWMLTSSPLSRLSEVESWSSSKDLRSGALASNHRTSFSSSISDSDRPRGQGVEPAYS
FVGMHCIFDQCKSAVTVLKFGHMSSDLLAYGASDGTLTVCNVSDPPTVINQLQGHSKDVT
DFDFSSNNQYIASSSADKTVRVWELSKGLCIRVIYGVSPQLCIRFHPVNNNFLSVGNANK
EITVFNFSTGRVIAKSIFDSEVTSMDHDHTGHLIFCGDAQGCIYSVTMDSRTGALSRSHR
YRSSSKQKFPITTVQYRSFSLLAGGPVLLTCTKDGSLSFFSVALEVQGYLTLRCSLKLTP
RIHSIRASFCPLLSLNKGEYIVAGSEDSNVYFYDLTRPKHTCVNKLQGHRFPVLVVAWNH
GENFLASADLYGVVIVWKRAKTS
NT seq 1512 nt   +upstreamnt  +downstreamnt
atggcggaagttacgagcatgaacaactgctccaaagacggcggagccattgaagctgtg
actaagaacgactgtactatcaacggtaccggtaaggatataattaaagtcactgtaaag
aaagcgaatgtgaaagatccggaaattttcagttgcttgcttcaaccggcgagttccgat
tcagatctcgattcaatcggtgttcggcgatttctactcgctcgcaaagctgagtccggt
gttcatcgccgacttgattggagatgtaatggaaaaggttatgtggcctatcgaaattac
attcgtaggccaagaaactgggagaattcacaaataccaagctatccaagcactcctgga
aacagtgggcaatggatgttaacttcaagtccactctcgcgtttgtccgaggtggaaagc
tggagctcaagcaaggatttacggagtggtgctttggcttcaaaccatagaacaagtttc
agctctagcattagtgatagtgatcgcccacgtggacaaggagttgaacctgcatattct
tttgtaggaatgcactgcatctttgatcagtgcaaatcagctgttacggttttgaagttc
gggcacatgagttctgatctacttgcatatggggcttcagatgggactttaacagtttgc
aatgtctctgacccccctacagttatcaatcaattacaagggcattcaaaagatgtcaca
gattttgacttctcgtcaaacaatcaatatattgcatcatcatcagcagataagactgtg
cgagtatgggaattatcaaaaggcctttgcatacgagtaatatatggagtctcgccacaa
ttgtgtattcgctttcatcctgtaaataacaactttctttcagttggcaatgcaaataaa
gagattactgtgttcaatttcagcacggggagagttattgccaaatccatcttcgatagt
gaggttacctcaatggaccatgatcatactggtcatctcattttctgtggtgatgcacag
ggatgtatatactctgtaactatggactcccgcacaggtgcgttgtcccgttctcatcgt
tatagaagtagcagtaaacagaaatttccaatcacaactgtgcagtaccgaagtttctca
ttactggctggtggcccagtgctgctgacatgtactaaagatggaagtctttctttcttt
agtgttgctttggaagtacaaggttacttgaccctgcgttgctcgcttaaattaactccg
agaatacacagtattcgagcatccttctgccctctgctttccctcaataagggagaatat
atagttgctgggagcgaggattcaaatgtctatttctatgatttaactcggccgaaacat
acatgcgtaaataagctacagggtcatcgttttccggttttagtagtagcttggaatcac
ggggagaactttttggcttcagcagacctgtacggcgttgttatagtatggaagagagca
aaaacgagttaa

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