Gossypium arboreum (tree cotton): 108483437
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Entry
108483437 CDS
T05776
Name
(RefSeq) transcription initiation factor IIF subunit beta-like
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108483437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gab03021
]
108483437
Transcription machinery [BR:
gab03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
108483437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
UBR1-like_wing
Tau95
Motif
Other DBs
NCBI-GeneID:
108483437
NCBI-ProteinID:
XP_017642320
UniProt:
A0A0B0MH47
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All DBs
Position
1:complement(99304576..99311621)
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AA seq
259 aa
AA seq
DB search
MDEDHSNSGFLETGKADRSVWLMKCPVVVAKPWKSQTSSSSDSQPVAKVVLSLDPRKPDD
PSSMQFTMEMAGSEIGNMPKSYALNMFKDFVPMSVFSETTQGRVAMEGKVEHKFDMKPHE
QNLEEYGRLCRERTNKSMIKNRQIQVIDNDRGVHMRPMPGMVGLISSNTKEKKKTTPVKQ
PEMKRTRRDRGELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRGSNQ
GTYELKPEYKKSVDDTAAE
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagatcacagtaatagcggctttttggagactggaaaagctgatagatcggtt
tggttaatgaagtgtccggtcgttgtggccaaaccatggaagagtcagacctcttcttct
tccgattcacagcctgtcgccaaggttgtcctctctctcgaccctcgcaaacccgatgac
ccttcttctatgcagtttactatggagatggctggatctgagattggaaatatgccaaag
agttacgccttgaatatgtttaaagactttgttcctatgtccgttttctctgaaacaact
cagggtagggttgcaatggaaggaaaagttgagcataaatttgacatgaaaccacatgag
caaaaccttgaggagtatgggaggctctgtcgtgaaaggacaaataagtccatgataaag
aacagacaaatacaggttattgataatgaccgtggagtgcacatgaggccgatgcctgga
atggttggtctgatttcatccaacaccaaggaaaagaagaaaacaacgcctgttaaacaa
ccagaaatgaaaagaacaagaagggatcgtggggaattggaagatataatgttcaagctg
tttgagagacaaccaaattgggctttaaagcaacttgtccaagagacagatcagcctgct
caattccttaaagagatactgaatgagctctgcgtgtacaataagagaggcagtaaccaa
ggaacttacgaacttaagccagagtataaaaaatctgtggacgacacagcagctgaatag
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