Gossypium arboreum (tree cotton): 108483478
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Entry
108483478 CDS
T05776
Name
(RefSeq) U-box domain-containing protein 13-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108483478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108483478
Enzymes [BR:
gab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108483478
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
U-box type E3
108483478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
Neurochondrin
zf-RING_UBOX
HEAT_2
MLKL_N
zf-Nse
zf-C3HC4_4
Arm_2
HEAT_EZ
zf-C3HC4_2
KAP
zf-C3HC4
DUF6746
zf-RING_2
zf-rbx1
MCAfunc
Motif
Other DBs
NCBI-GeneID:
108483478
NCBI-ProteinID:
XP_017642398
LinkDB
All DBs
Position
1:complement(8106374..8110727)
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AA seq
658 aa
AA seq
DB search
MEEEKGALVQGLIDAVNQIASIGDYSCAVKKEYCNLARRLKLLTPMFEEIREIKEQIPEE
TVKALVSLKEALVSAKELLIFGSEGSKIYLVLEREQIMHKFHEVTARLEQALSRISHENL
DILEEVKEQVELVLAQFRRAKGRVDVPDVELYEDLLSLYNKSNDAAADPEVLRRLAEKLQ
LVGIAELMQESLALHEMVSASGGDPGAIFEKMSNLLKEIKDFVQTENPNLDAPAREKNLP
PSSSSAQTTTVANHKAPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIEKWLEQGHRTC
PKTQQTLSNPALTPNYVLRSLIAQWCEANGIEPPKRPSSSQPSKAKFACSPAELTKIQIL
LCKLSSSNPEDQRMAAGEIRLLAKRNADNRVAIAEAGAIPLLVKILSTPDSRTQEHAVTA
LLNLSICEDNKGSIISSGAVPGIVQVLKKGSMEARENAAATVFSLSVVDENKVAIGASGA
IPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKTVRAGVIPTLMHLLTEPGGGMVDEA
LAILAILASHPEAKSAIGAAKAMPVLVDFIGNGLPRNRENAAAVLVHLCAGDQQHLAEAE
ELGVMSHLVDLAQNGTDRGKRKAAQLLQRLSRFVEQQKRSQSQAEAQAEQSLSQSHAQ
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagagaaaggagcgctggtgcagggcttgatcgatgcggtgaaccaaatagct
tcgatcggtgactacagttgcgccgtgaagaaggagtattgcaacctcgctaggagactg
aagctgttgacgccaatgttcgaggagattagagaaatcaaagagcaaatccctgaagaa
acggttaaagctttggtatcgttgaaagaagctctggtttcggctaaggagttgcttata
ttcggaagtgaaggcagcaagatttacctggttctagagagggagcagattatgcataaa
tttcatgaagtgacagctcgattggagcaggctttgagtagaatttcccatgagaatctt
gacatcctagaagaagttaaggaacaggttgagcttgttctagctcagttcaggagagct
aaagggagggttgatgtacctgatgttgagctgtatgaggatctattgtcactctacaac
aagagcaatgatgcagcagcagatccagaggtactaaggagattggctgagaagttacag
ttggtgggaatagctgaacttatgcaagaatctctagctctacatgagatggtttctgcc
agtggtggagatcccggggcaatatttgagaagatgtcaaacttattaaaggaaatcaag
gattttgtacagacggaaaatcctaacttggatgctcctgcaagagaaaagaatcttcct
cctagtagcagcagtgcgcaaacaaccactgttgcaaatcacaaggccccagttatacca
gatgatttccgctgtccaatatcccttgagctgatgaaggatcccgtcattgtttcaaca
gggcagacttatgaacgatcttgcattgagaaatggctggagcaagggcatcgaacatgt
ccgaagacacaacagactcttagtaatcctgctcttactcccaattatgtattgcgaagt
ttaatagctcaatggtgtgaggcaaatggcattgaaccgcccaaaaggccgagtagttct
cagcccagtaaagccaaatttgcctgctcgcctgctgaacttaccaagattcaaattctc
ctctgtaagctctcatccagcaatcctgaagaccaaagaatggctgcaggtgaaatccgt
cttcttgctaaacgcaatgcagataatcgtgtagccattgctgaagctggggctatacct
ctccttgtaaaaatcctttcaacacctgactcacgcacccaagaacatgctgtgacagca
cttcttaacctttctatttgtgaagataacaaaggaagtatcatatcctctggtgcagtt
cctggtattgtccaggtgcttaagaaggggagcatggaagctagagaaaatgcagcagcc
accgtcttcagcctttcggtagtggatgaaaataaggtggcaattggcgcctcgggagca
atccctccactagtgacactgctaagtgaaggcacacaaaggggcaaaaaggatgcggca
acagcactcttcaacttgtgcatttaccaagggaacaaaggaaaaactgtgagagctgga
gttatacctacgttaatgcatttgctgacagaacctggaggcggaatggtggatgaggca
ttggccatacttgcaattcttgctagccatcctgaagcaaagtccgccattggagcagca
aaggctatgccagttttggtagattttattggaaatggattgccgaggaacagagagaat
gcggctgctgttttggtgcacctttgtgccggagaccaacaacatctagcagaggctgag
gaactaggcgtgatgagtcatttggtggacttggcacaaaatggtacggataggggcaag
cggaaagctgctcaactgctccagcgcttaagcagatttgttgagcagcaaaagcggtca
cagtcccaagctgaggcccaagcagagcagtccctatctcagtctcatgctcagtag
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