Gossypium arboreum (tree cotton): 108483565
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Entry
108483565 CDS
T05776
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gab01009
]
108483565
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gab03021
]
108483565
Enzymes [BR:
gab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
108483565
Protein phosphatases and associated proteins [BR:
gab01009
]
HAD phosphatases
Fcp/Scp phosphatases
108483565
Transcription machinery [BR:
gab03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
108483565
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPOC_CPL1_2
dsrm
NIF
Motif
Other DBs
NCBI-GeneID:
108483565
NCBI-ProteinID:
XP_017642517
LinkDB
All DBs
Position
6:551696..560085
Genome browser
AA seq
948 aa
AA seq
DB search
MSMYKSIVYQREEVLGYVEIYPQQQQQLKEEEMKEIRIEYLTQSSERCPPLAVLHTITCN
GICFKMEPPKDSSYSASEDMPRLHLLHSECIRNNKTAVMPVRDSELHLVAMYSRNSDRPC
FWGFNVGRGLYDSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIESLQRKINTEVDPQ
RVAALMAEVKHYQDDKTILKQYVENDQVVENGKVIKVQSEIVPAYSDSHQPIIRPLIRLQ
EKNIILTRINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRL
LDPESNLINSKELLDRIVCVKAGYRKSLFNVFQDGICHPKMALVIDDRLKVWDQKDQPRV
HVVPAFSPYHAPQAEANNTTPILCVARNVACNVRGGFFREYDEVLLQRIPEISYEDDTKD
IPSPPDVGNYLVSEDDSSASNGNKDQPLFDGMADAEVERRLKEAISAASTVSSAAINLDP
RLAPSLQFTIPSSSSVPLPIVEFPEAAQVITPVAPVVALEQSLQSSPAREEGEVPESELD
PDTRRRLLILQHGQDTRDHTPEPAFPPVGPKMQVPIPHAQSCGSWFPAEEEMSQRQLNRA
VPKDFPLDPERMNIEKHRHPPFFPKFENSITSDRILHGNRRFQKEALRRDDRLGLNNTSS
YHSFSGEEIPLGRSSSFHNALDFESGHTIPIGETPVAVLQDIAMKCGAKVEFRSALVASL
DLQFSIEAWFAGEKIGEGIGKTRREAQCQAAEDSIRYLADTYLSHIKPDSGSAQADVSRL
SNMNDTAFLGNMNSHGNQPSSKEEFMSFSIASESPRLVDPRLEGSKRSMGSIAALKELCM
MEGLRVAFQAQPPSFNPFQNDEVYAQVEVDGQVFGKGTGLTWEEAKMQAAEKALGNLRSM
LGQFTHNRQSSSSSLQGIQGKRLKPEFPQVPQWMASYGRYPKNAPWVP
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgtacaaatcaattgtgtatcaaagggaagaggtgttgggatatgtggagatt
tatccacaacaacaacagcagcttaaggaagaagaaatgaaggaaatcaggatagaatat
ttgacgcaaagcagtgagagatgtcctccattggcagtgcttcataccattacttgtaat
gggatttgcttcaaaatggaaccaccaaaggacagcagctactctgcttctgaagatatg
cctcggcttcatcttttgcactctgaatgtatcagaaacaacaagactgcagtaatgcct
gtgagagattctgagctccatttggttgcaatgtattctaggaatagcgacagaccctgt
ttctggggattcaatgtaggaaggggactctatgattcttgtcttgtcatgctgaaccta
agatgtctaggaattgtctttgatctggatgaaactctcattgttgcgaatacaatgcgc
tcctttgaggacagaatagagtctttacaacgaaagataaacaccgaggttgatccacaa
cgcgttgcggctctgatggcagaggtaaagcattatcaagatgataagaccatattaaag
cagtatgtagagaatgatcaggttgttgaaaatgggaaggtgataaaggttcagtcagag
attgttccagcctattctgatagtcatcaacctattattcgaccgctcattcggttacaa
gagaaaaacattattctgactcgcatcaatccacagattcgtgatactagtgttcttgtg
agattgaggcctgcatgggaggatctccgaagctacttgactgcaagaggacgaaaacgg
tttgaggtttatgtttgtacaatggctgaaagggattatgctttggaaatgtggaggctt
cttgatcccgagtcaaatctgataaattcaaaagaattgttggatcgtattgtttgtgtt
aaggccggttataggaaatcattattcaatgtctttcaagatggaatatgccatccaaaa
atggcattggttattgatgatcgcttaaaagtttgggatcagaaagatcaacctcgtgtg
catgttgttcctgcattttccccttaccatgcccctcaagctgaagcaaataatactact
ccaattctatgtgttgcaagaaatgttgcttgcaatgttagaggcgggtttttcagagaa
tatgatgaagtccttttacaaagaatacctgaaatttcatatgaagatgatactaaagat
attccgtcacctccagatgtgggcaactatttggtctctgaggatgacagttctgcttca
aatggaaacaaagatcaacctttgtttgatggcatggcagatgctgaggttgaaagaaga
ctaaaggaggcaatttcagctgcatcaactgtctcttcagcagccattaacctagatcca
agacttgctccttctctacaattcaccataccatcttctagttcagttccattgccaata
gttgagtttcctgaggcagctcaagtgattacaccagtggctcctgttgtggcccttgaa
caaagcttgcaaagttccccagcaagagaagaaggtgaggttccagaatcagaattagat
cctgatacaaggaggaggcttctgatactgcagcatgggcaagataccagagatcacaca
ccagaacctgcatttccacctgtaggacctaaaatgcaagttccaatcccgcatgctcaa
tcctgtggaagttggtttcctgcagaggaggagatgagccaacgacaactgaaccgagca
gttcccaaagattttcctttggatcctgagcgaatgaatattgagaaacatcgacatcca
cccttttttcccaagtttgagaattctattacatctgatagaattcttcatggaaaccga
agattccaaaaagaggcacttcgaagagatgaccgattggggttaaacaatacatctagt
tatcattctttttcaggtgaggagataccacttggtagatcatcttctttccacaacgct
cttgattttgaatcaggacatactattccaattggagaaaccccagttgcagttttacaa
gatattgcaatgaagtgtggagccaaggtggaattcagatcagctttggttgctagcctt
gacctgcaattctccattgaggcttggtttgccggggagaaaatcggtgaagggattggt
aaaacaagaagagaagcccagtgtcaggctgctgaggattctataagatatttagctgat
acatatttgtctcatattaagcctgattctggttctgcacaagctgatgtaagtaggttg
tccaacatgaatgacactgcctttcttggtaatatgaattcacatgggaaccaaccatca
tctaaagaggaatttatgtcattttcaattgcatcagaatcacctaggcttgttgacccg
aggctcgaaggctccaagagatctatgggttcaatcgctgcacttaaagaactatgcatg
atggagggtctcagggtagcttttcaagcacagcctccttcatttaatccatttcagaat
gatgaagtatatgcacaggttgaagtagatgggcaggttttcggcaaaggaactgggttg
acatgggaagaggctaaaatgcaggctgctgaaaaggcccttggaaatctaaggtcaatg
cttggtcaatttacgcataatcgtcagagttcttcgagttcgttgcaaggtatacaaggt
aaacgtctaaagccagagtttccacaagttccacagtggatggcttcttacggtagatat
cccaagaatgctccttgggttccctga
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