KEGG   Gossypium arboreum (tree cotton): 108483629
Entry
108483629         CDS       T05776                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.3-like isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
gab  Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:gab00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:gab04812]
    108483629
Cytoskeleton proteins [BR:gab04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     108483629
SSDB
Motif
Pfam: Katanin_con80 WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WDR55 EIF3I Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML Beta-prop_SCAP Beta-prop_SPT8 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_WDR75_1st NBCH_WD40 eIF2A WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_Vps41 WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_HPS5 Beta-prop_IP5PC_F Beta-prop_VPS8 Beta-prop_WDR19_1st Beta-prop_WDR75_2nd
Other DBs
NCBI-GeneID: 108483629
NCBI-ProteinID: XP_017642612
LinkDB
Position
6:complement(513992..520578)
AA seq 927 aa
MAKRGYKLQEFVAHTANVNCLSMGKKTRRLLITGGDDHKVNVWSIGKPTSLMSLCGHTSP
VESLAFDLAEVFVLAGASTGVIKLWDLEETKMVRGLTAHRSNCTAMEFHPFGEFFASGSM
DTNLKIWDIRKKGCIHTYKGHTRGISTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLNEF
KFHEGHIRSIDFHPLEFLLATGSADGTVKFWDLETFELIGSSRPEATGVCSITFHPDGKT
LFCGLDDGLKVYSWEPVACHDSLDIGWSTLGDLCINEGKLLGCSCYRNSVGVWGADVSHI
EPYGRNDHSEKKFNLKGSYSSEKAGSGIRSTLGSQPLSLDYETKEIKNIYVDTAGSNTIA
APKDGSLSSTEVVLPLDASEISNPEAEEQSPGTGVNAKSNGQSGNNPVVKETTNSVKESI
TFSRTKPGMLLRPAHVRKPSVNKFEVEKLSAVVESGRLDTAMDMNSRTSLVLEDGAKKPC
DEKDSNIETVTEKPEKMLSPQTPSNQETRNESLDHNKGSNYVKFVNGVAVVRGRTRSLVE
RFERRDLLNCSGDLATDSIAPAVPEADKTPAIIEGGTKISKTQPISANDVSTAESQSSRT
EPASSCEGGITASPIPTRESTPTSVGIITGDQISRRESTFTPGRMIARNQNSRKESTFAS
DRIITINRISRRESTSTSDGVITKNQITRNESTSISDGIISRNQHSRKEAAAANDVSGPN
GLYTENQISRRGFNSGNDWNVTNIESRISKDESISTNDGNLTESLMQKHDTFLSTLRSRL
TKLQVVRHFWEKNDIKGSIGALRKLPDHSVQADVIGVLMEKMEILNLDLFSGLLPVLMGL
LDSKMERHINISLEMLLRLVAVFGPMIRSTVSARCSVGVDLHAEQRRECCNQCFMQLQKI
QKLLPPLIRRGGTIARGAQELNLALQE
NT seq 2784 nt   +upstreamnt  +downstreamnt
atggcgaagcgtggatataagctgcaggaatttgtggctcatacggctaatgtgaattgt
ttaagtatgggaaaaaagacacgtaggcttcttattacaggcggagatgatcataaggtc
aatgtttggtcaattgggaaacccacttctttaatgagtctttgtggtcatactagtcca
gtggaatctttagctttcgatttggccgaagtttttgtacttgccggtgcatctacaggt
gtgattaagctttgggatctcgaagaaacaaagatggttcgtggacttactgcacataga
tccaattgcactgctatggagtttcatccgtttggcgagttttttgcatctggttccatg
gatacaaatttgaagatatgggatattagaaaaaagggatgcattcacacatacaagggt
catactcgaggcattagtacgattcgattcactcctgatggccgttgggtagtttctggt
ggatttgataatgttgtaaaggtgtgggatcttactgctggaaaactcttgaatgagttc
aagtttcacgaaggacatattcgctccatagatttccatcctctcgagttcctcctcgcc
acaggttcggcggatggaacggtaaaattctgggacttagaaacttttgaactgattgga
tcttcgagacctgaggctaccggggtttgctcgattacctttcatcctgatgggaaaacc
cttttctgtggattggatgatggtttgaaggtttattcatgggagccagtggcttgtcat
gattctcttgatatcggatggtcaacacttggtgacctctgcatcaatgaaggcaaactt
ttggggtgctcgtgctatagaaattctgttggagtttggggagcagatgtatcgcatatt
gagccatatgggcgaaatgaccattccgagaagaaatttaatcttaagggaagttattca
tcagagaaagcagggagcggcataagatcaactttgggatcacagcccctatctcttgat
tacgagaccaaggaaataaagaacatatatgttgacacagctggcagtaatacgattgct
gcaccaaaagatggctctttgagttctacagaagtggtgcttccgttggacgccagtgaa
ataagtaatccagaagctgaggagcagagtcctggaacaggagttaatgctaaatctaat
ggacaatcaggtaacaaccctgtcgtgaaagagactacaaattcggtaaaagaatctatc
accttttcaaggacaaaaccaggaatgttgctcagacccgctcatgttagaaaaccatca
gtcaacaagttcgaggttgaaaagctatcagctgtggttgaatctggaaggttagacact
gcaatggatatgaattctcgaactagtcttgtattggaagatggagctaaaaaaccctgt
gatgaaaaggattcaaacattgaaaccgttactgagaaacctgaaaagatgttatcaccg
cagacaccctctaatcaagaaactcgtaatgaatcactcgatcacaacaaaggctcaaac
tatgtcaaatttgtgaatggagtggctgttgttcgaggaagaacccgtagtctggttgag
agatttgaacgaagagacttattaaactgcagtggtgatctggcaactgacagtatagct
cctgctgtacctgaagcagataaaacaccggccataatcgaaggagggacaaaaatatct
aaaacacaacctatatcggccaatgatgtaagtactgccgaaagtcaaagttctagaact
gaaccagcttctagctgcgagggaggcattactgctagtccgattcctacaagggaatcg
acgcctacttccgttgggatcattactggagatcaaatttctagaagggaatcaaccttc
actcccggtaggatgattgctcgaaatcagaattctagaaaggaatcaaccttcgcctct
gataggatcattaccataaatcgaatttctagaagggaatcaacctctacttctgatggg
gtcattacgaaaaaccaaattactcgaaacgaatcgacttccatttctgatggaatcatt
tctagaaatcaacattctagaaaggaagctgctgctgctaatgatgtgagtggaccaaac
ggtctatatactgaaaatcagatttctaggaggggattcaattctggtaatgattggaat
gttactaatatcgaaagccgaatttcaaaggacgagtcgatatctactaatgacggaaac
ctgactgaaagtctcatgcaaaagcatgatacattcttaagtactcttcggtcacgcttg
acaaagttacaggtggtgcggcatttttgggaaaagaatgacattaaaggttccatcggt
gcactgcgtaaactgccagatcattctgtgcaagctgatgttatcggtgttctcatggaa
aaaatggagattctcaacttagatctgttttccggcttgcttcccgtgcttatgggctta
ttagatagtaaaatggaaaggcatataaatatctcattggagatgctcctaaggcttgta
gctgtttttggtccgatgatacgctcaactgtctcagcccgatgtagtgttggtgttgat
cttcatgctgagcagaggcgagaatgttgcaatcaatgttttatgcaattacaaaagatt
caaaaacttctcccaccactcataaggagaggcggtacgatagcaagaggtgcacaggaa
ttgaatctggctcttcaagaatga

DBGET integrated database retrieval system