Gossypium arboreum (tree cotton): 108483691
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Entry
108483691 CDS
T05776
Name
(RefSeq) WD-40 repeat-containing protein MSI3
KO
K10752
histone-binding protein RBBP4
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03082
ATP-dependent chromatin remodeling
gab03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108483691
03083 Polycomb repressive complex
108483691
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gab03036
]
108483691
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
108483691
Histone modification proteins
HAT complexes
HATB complex
108483691
HDAC complexes
Sin3A-HDAC complex
108483691
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
108483691
PRC2.2
108483691
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
108483691
Heterochromatin formation proteins
Other heterochromatin formation proteins
108483691
Chromatin remodeling factors
NuRD complex
108483691
NuRF complex
108483691
NuRF complex (fruit fly)
108483691
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
EIF3I
WD_LRWD1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
ANAPC4_WD40
Beta-prop_SPT8
MIOS_WD40
Beta-prop_RIG_1st
DUF6922
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
108483691
NCBI-ProteinID:
XP_017642721
UniProt:
A0A0B0M9Y2
LinkDB
All DBs
Position
1:complement(123273653..123276232)
Genome browser
AA seq
410 aa
AA seq
DB search
MAGDSEMNPEQVEEEFSVWKKNTPFLYDLVISHPLEWPSLTVHWVPSSPTPYGPDPTFNV
HKLVLGTHTSGGAPDFLMIADAVLPTLASESNIAAKNDDPVIPKVEITQKMRVDGEVNRA
RCMPQNPVIIGAKTSGSDVFVFDYAKQAAAKEQEGDCVADLRLRGHEKEGYGLSWSPFKE
GYLLSGSQDHKICLWDLSSWPQDKVLDATHVYEAHESVVEDVSWHLKNENIFGSSGDDCM
LMIWDLRTNQTEQRVKAHDREINYLSFNPYNEWVLATASSDSTVGLFDVRKLTVPLHVLS
SHSGEVFQVEWDPNHETVLASSGDDRRLMIWDLNRIGEEQLEIELDADDGPPELLFSHGG
HKAKISDFSWNKNEPWVISSVAEDNTLQVWQLAESIYRDEDDTQTAEDHP
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgattcagagatgaacccagagcaggtagaagaagagttcagcgtatggaag
aagaacacccctttcctctatgatctcgtcatttctcaccctctcgaatggccttctttg
actgtccattgggttccttcttctcccactccttacggacctgaccctacttttaacgtt
cacaaactcgtcctcggaactcacaccagcggcggcgcccccgattttctaatgatagcc
gacgcagttctccccactctcgcctctgagtccaatatcgctgctaaaaatgatgaccca
gttatccctaaggttgagataacacagaaaatgcgtgttgatggggaagtcaacagggct
agatgtatgcctcaaaacccggttattatcggcgcaaagaccagtggctccgacgttttc
gtgtttgattatgccaagcaggctgcagctaaagagcaggagggtgactgtgttgctgat
ttgaggttgaggggtcatgaaaaggaagggtatggattatcatggagtccatttaaggag
ggttatcttttgagtggttcacaagaccataagatatgcctttgggacttgtcttcttgg
cctcaagataaggttcttgatgcaacccatgtttatgaggcccatgagagtgtggttgaa
gatgtgtcatggcatttgaagaatgagaatatatttggttcttctggtgatgattgtatg
ttaatgatctgggacttgcgcactaaccaaactgaacaacgtgttaaagctcacgacaga
gagatcaattatttgtcattcaatccttataatgagtgggttctggctacagcatcgtcc
gactccaccgtaggtttgtttgatgtacgaaagctgactgtacctttgcatgttttaagc
agccacagtggagaggtctttcaggtagaatgggatcctaatcacgagacggtgctggca
tcttctggtgatgataggaggttgatgatttgggaccttaacaggattggagaagagcaa
ttagaaatcgaattagatgccgatgatggccctcccgaacttctcttttctcatggaggc
cataaagctaagatttcagatttctcgtggaacaaaaatgagccatgggtgatttctagt
gtagctgaagacaacacacttcaagtgtggcaattggcagagagtatatatcgagacgag
gatgacactcaaactgccgaagaccatccatag
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