Gossypium arboreum (tree cotton): 108483751
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Entry
108483751 CDS
T05776
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108483751
04121 Ubiquitin system [BR:
gab04121
]
108483751
Enzymes [BR:
gab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108483751
Membrane trafficking [BR:
gab04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
108483751
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108483751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-C3HC4_3
zf-ANAPC11
zf-HC5HC2H
zf-RING_UBOX
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
108483751
NCBI-ProteinID:
XP_017642804
UniProt:
A0A0B0NDA0
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All DBs
Position
1:3989464..3991621
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AA seq
364 aa
AA seq
DB search
MAARYWCYQCSQVVTPIMEAEIKCPFCRGGFIEEMSNGTTDSAPDMDSHIQSDRALSLWA
PILLGMLGNPRRRRRLRRIEFEEEDAENSDGEALHGGDTDLDRELESIIRNRRRNSASIV
QLLQGVRERMVSEGENSENDRDRDRDRDRDGVIFINPFNQTIIVQGSYDSNQGGQNRNSD
RIGSIGDYFIGPGLDILLQHLAVAQNDPERYGTPPAQVEAIMALPTVKIEENLKCCVCMD
DFEAGSEAREMPCKHKFHSGCILPWLEIHSSCPVCRYQIPAVGQKLNSERPGNNSDRRES
ESNVHGRGSGEGEGEGDGRSGRRFSFPWPFNGLFTSGSQSGRGNSSSSTASSSQSRNASQ
TNEN
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaggtactggtgttatcagtgttctcaagtggttactcccatcatggaagct
gagattaaatgcccattttgtcgaggtgggtttattgaagaaatgagcaatggtacgaca
gacagtgctccagacatggattcccatatccaatctgatcgagcactctcactatgggca
cccatcttgttaggtatgctgggtaatcctcgtcgccgcagaagacttagacgtatcgag
tttgaagaagaggatgctgagaattctgatggcgaagctctccatggaggcgatactgac
ttggaccgagaacttgaatccatcattaggaatagaagaaggaactctgcatcgatcgtg
cagctgcttcaaggtgttagagagagaatggtatctgaaggcgagaattctgagaatgat
agggatagggatagggatagggacagggacggagtaattttcatcaatcctttcaatcag
actatcattgtccagggctcttatgattccaatcagggtggtcaaaaccgaaactccgac
cgcataggttctataggtgattatttcatcggtcctggtttagatatattgttgcagcat
ttggcagtggcacaaaatgatcccgaaagatatggaacaccaccagcacaagtagaggca
attatggccttgccaaccgtgaaaattgaggagaatttgaaatgttgtgtgtgtatggat
gatttcgaggctggtagtgaagcaagggaaatgccatgtaagcataagtttcatagtggg
tgtatattgccatggttggagatccatagttcttgtccagtttgcagatatcaaatacct
gctgttggacagaaactcaattcagagaggcctgggaataatagcgacagaagagaaagt
gaaagtaatgttcatggacgtggtagtggggaaggagagggtgaaggggatgggagaagt
gggagaaggttctcatttccatggccattcaatggcttgttcacatcaggatcgcagtcc
ggcagagggaattcatcgtcctcgacagcttcaagctctcaatccagaaatgcttctcaa
acaaatgagaactga
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integrated database retrieval system
