KEGG   Gossypium arboreum (tree cotton): 108483919
Entry
108483919         CDS       T05776                                 
Name
(RefSeq) pre-mRNA-splicing factor SPF27 homolog isoform X1
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108483919
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gab03041]
    108483919
   03400 DNA repair and recombination proteins [BR:gab03400]
    108483919
Spliceosome [BR:gab03041]
 Complex B
  Other components
   Prp19 complex
    108483919
 Complex C
   Prp19-CDC5 complex
    108483919
DNA repair and recombination proteins [BR:gab03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    108483919
SSDB
Motif
Pfam: BCAS2
Other DBs
NCBI-GeneID: 108483919
NCBI-ProteinID: XP_017642949
LinkDB
Position
6:complement(67358155..67365749)
AA seq 254 aa
MGGNGEEILMLEAPPETARPWASASTAETLDALPYIDDDYGNPMVKEEVDRLVEEEMRKS
IKKPADFLKDLPPLPSFNFQHHPMIGKEYERVRAGRPPVTLDFSSRYQVEPPPMNKRNDE
TAWKQAVQRSQRSLQHQVIRLENLELMLKYGPDVWRQNNQRLGGFLASRMQKLAQQQNEK
IETVNRERKFHQQNTAYELNALSTQWKELCLKNIEIHAACSHTEKHIAELRREAAERGWN
LEANLENGALSPST
NT seq 765 nt   +upstreamnt  +downstreamnt
atgggcggcaacggcgaagagatccttatgttggaggcaccgcctgaaactgctcggcca
tgggcctctgcttccactgccgagactttggacgcattaccctacattgacgacgactac
gggaacccaatggtcaaggaagaggttgatcgattggtcgaagaagagatgcgaaagagt
atcaagaagccagctgacttcctcaaggatttaccccctcttccctccttcaattttcag
catcacccaatgattggcaaagaatatgagcgcgtcagagcgggtaggccacccgtgacc
cttgatttttcttcacggtatcaagttgaaccaccgcccatgaataagagaaacgatgaa
actgcttggaaacaggcagttcaaagatctcagcgctcattgcaacatcaagtaattagg
ttggaaaatttggagttgatgttaaaatatggccctgatgtttggagacagaacaaccaa
cgactgggaggatttttggccagcaggatgcaaaaactagctcaacagcaaaatgagaaa
attgaaactgtaaaccgtgaaagaaaatttcatcagcaaaacactgcatatgagctcaat
gctttgtccacgcaatggaaggagctttgtctgaaaaacattgaaattcatgctgcctgt
tctcatactgaaaagcatatagcagaactcaggagagaagctgctgagagaggctggaac
ttggaagctaatttggagaatggtgctttgtcaccttcaacatag

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