Gossypium arboreum (tree cotton): 108484021
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Entry
108484021 CDS
T05776
Name
(RefSeq) nuclear pore complex protein NUP85
KO
K14304
nuclear pore complex protein Nup85
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108484021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108484021
03036 Chromosome and associated proteins [BR:
gab03036
]
108484021
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108484021
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
108484021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
108484021
NCBI-ProteinID:
XP_017643116
UniProt:
A0A0B0MUR7
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Position
6:complement(107961424..107966126)
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AA seq
715 aa
AA seq
DB search
MPGVSSDSARGALVPLSPESPGAVVYPLRHGLKSPISRLSISWSRGNSLRVSVFAAPSSD
GSVNDGDGGKVVEVKLGGGDGEISEAHWRRIAYGSVSPFALLQSRKNAVSSLSKMSMNSS
PYDGDWWDYIMEYSKDINALLVNQKSASVPVLDDTKSVITKGEEPTSLKAAWELLEMFYA
EKPSHSWLPERLVDWLADYDSLFSGTHPTVHSKLVDFQKEFVNLQVVEDDPKYWEVMSSA
LAVGWLNIVVKMLRLHGSYQLDQLSNRETENGLVEAVAVLISKMPRMRLEQEAGKLGECY
KAKPDFVKAWEKWRGQINKLDSSAFWFQCAHQQTREGLRSMLQIMLGNANSLCSATYNWI
ELYISHFLYMRPLTVGLESMYSLAQKSIQLKPMASAHRLMGLIIGILGENTEVVLAECLK
GFGPWMVAHAIELLTAGSDHAEMLLHEERQNLGGISIEELHRLVYAQVLSSFPLTWQIAP
IYLISCMKHGMILLQILLSKQPVQDNQLLLKRIEICRLYELHSVTSNIMKIAGVHHWKHG
RKGSGVFWLQQARDEYRLNRIALQLFDSVGKTISDESFKQWEGLIQLLGSDSKTAGGLEF
LHKYRDFKKSLRQIHDGKATDPARQAVESLISLMKNPSTPQRFWLPLLYDSLKLLNWKER
PLLNVSQTNLLLNKLQELSMARLRPDFIESELPPQALNSVRLALGTNLGRAILEE
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgcccggcgtctcttctgattccgcccgcggcgctttggttccactttcacccgagtcc
ccgggcgcggtggtgtatcctctccgccatggtctcaagtctccaatctctagactctcc
atctcatggtcacgcggtaactccctccgagtctcggttttcgccgctccttcttccgat
ggctccgtcaatgatggtgacggaggaaaagtagtggaagtgaagctcggcggcggagac
ggcgagatcagcgaggctcattggcggaggatcgcctacggttcggtctctccttttgct
ctactccaaagcaggaaaaatgctgtctccagcttgtccaaaatgtccatgaattcttca
ccttacgatggtgactggtgggattacataatggagtacagcaaggacataaatgccctt
ctagttaatcagaaatcggcttcagttccggttctcgatgacacgaagtcagtcataact
aaaggagaggaaccaactagtttgaaggctgcgtgggagctattggaaatgttttatgca
gaaaagccatctcattcatggttacccgaacgccttgttgattggttagctgattacgat
agccttttctctggaacacacccgacagtccactcaaagcttgttgattttcaaaaagaa
tttgttaacttgcaggttgtggaggatgatcccaaatattgggaagttatgtcatctgca
cttgctgttggttggctgaatatcgtagttaaaatgttgcgcttgcatggttcttatcaa
ttagatcaactcagcaatcgtgagacagagaatggtcttgtggaggcagttgccgttctt
atttcaaaaatgccacgcatgcgtttggaacaagaagctgggaaattgggtgaatgctat
aaggccaagcctgattttgtaaaggcatgggagaaatggcggggtcagataaataagctg
gattctagtgcattctggtttcagtgtgctcaccagcagactcgggagggcttgagaagt
atgttacaaataatgctgggtaatgctaatagtctctgctctgcaacatataactggata
gagctgtatatttctcacttcctatacatgaggccattaacagtggggttagaaagcatg
tacagcttggcacagaaaagcattcaattgaaaccaatggcttctgcacataggttgatg
gggcttataattggaattcttggggaaaatactgaggttgtattagcagaatgcttgaaa
ggatttggtccttggatggttgcgcatgccatagagttgttgactgctgggagtgaccat
gcagaaatgcttttacatgaagagcgtcagaacttggggggaataagcatagaggagctt
catcgacttgtttatgctcaagtcctatcttcatttccattaacttggcaaattgctcca
atttatcttatatcatgcatgaagcacgggatgattctgttacagatattattgtccaag
caacctgttcaagataatcagttattgctgaagaggatagagatttgccgcctttatgaa
ctccatagtgtaacttcaaatattatgaagattgctggagtacaccactggaagcatggt
cggaaaggttctggagtcttttggcttcagcaagctcgggatgaatatcgtcttaatagg
atagctctgcaattgtttgattcagttggaaaaacaatctctgatgagagtttcaagcaa
tgggaaggtttaattcagttattgggttcagattctaagactgctggtggactagagttc
ctacacaaatacagagatttcaagaaatctcttcggcagattcatgacggaaaggctaca
gatcctgctcggcaagctgtggaatctctcatatcacttatgaaaaacccttctacgcct
caacgcttttggctgccgcttctttatgattcgttgaagctgcttaattggaaggaacgt
cctttgttgaatgtgtctcagacaaatcttctattaaataaactacaagaattgtccatg
gcaaggcttcggccggactttattgaatctgagttaccaccccaggccttgaactctgtt
agactagctcttggcacgaatcttggacgtgcaatcctagaggaatga
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