Gossypium arboreum (tree cotton): 108484048
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Entry
108484048 CDS
T05776
Name
(RefSeq) NF-X1-type zinc finger protein NFXL2
KO
K15683
NF-X1-type zinc finger protein NFXL1
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108484048
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
108484048
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
108484048
NCBI-ProteinID:
XP_017643156
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Position
8:complement(71564288..71570107)
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AA seq
879 aa
AA seq
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MNTTANYHPPPSSQPPFSDSDLDSGSDSENFQVGSDLSNSIFKTYLEFSSSSSSSSSITA
VDLSKIQSFLTSSSSGALSCLICLERIRPSDPTWSCSSLCFALFHLLCIQSWARQSSDLS
AARAAARLPITAETAAKQATWNCPKCRSSYSKSEIPRCYLCFCGKLRDPPSDNPWILPHS
CGEICNRPLPNNCGHFCLLLCHPGPCPSCPKSVKARCFCGSVEDFRRCGFKNFSCNKLCK
KRLDCNKHNCSEICHPGTCPPCRARETYRCRCGKKEEEKDCCDRDYRCENECKKLLNCGK
HVCERGCHGGDCGECPLQGNRTCPCGKRIYEGLPCDGVAPVCGATCNKLLNCGFHRCPER
CHKGSCVETCRTMVKKACRCGGLKKEVPCYQDLSCERKCLRMRDCGRHACKRRCCDGDCP
PCSEVCDKRLRCKNHKCPAPCHRGACAPCPIMVTISCACGETHFEVPCGTEMDHKPPKCR
KLCKIAPLCRHASTSKPHRCHYGACPPCRAPCEEEYPCGHKCNLRCHGPRPPPNPEFTLK
PKKKKSNHQTECTPGTPCPPCPELVWRPCVGEHFGAERMMVCSNTTRFSCDNLCGNLLPC
GNHYCTKTCHPLETQPSSSGHQKRSESCEVCNLPCQKVRMPKCSHPCSLPCHPGECLPCK
VLVKRSCHCGAMVHAFECIHYNNLSEKDQVAARSCGGPCHRKLPNCTHLCPEICHVDKCP
APDKCSKKVTVRCKCQTLKKEWICQDVQAAYRDTGNDPKDIPKNQFGLGLLPCNSDCKSK
VQEVESALQLRKPKVLEKKEPENEKHGPKRRKRRDRIQEGKQVSRFQEFVASVKRLLLFI
IIGAVLIAVTYYSYKGLLQLSDWMNEVELQRARRRRSRF
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgaacacaacggccaactaccacccgccaccgtcatcgcaaccgccattctcggactcg
gacctggactcgggctccgattccgagaacttccaagtcggatccgatctctcaaactct
attttcaaaacctaccttgaattttcctcatcttcgtcatcatcatcttcgatcacagcc
gttgatctgtccaagatccaatcattcttaacctcttcctcctccggcgctttatcatgc
ctcatttgcctcgaacggatccgtccctctgatccgacgtggtcttgctcgtccctctgc
ttcgctctcttccacctcctctgcattcaatcatgggcccgccaatcttctgacctttca
gcagcacgcgccgctgcacgtctccctatcaccgcagaaaccgccgccaaacaagccacc
tggaactgccccaagtgccgctcctcctactccaaatctgaaatccctagatgttacctt
tgcttctgcggtaagctccgagatcctccgtctgacaacccgtggatcctccctcactct
tgcggcgaaatatgtaaccgcccgttgccaaacaattgcggtcacttttgcctccttttg
tgccaccctggtccctgcccgtcctgcccgaaatccgtcaaagcgcgttgcttttgcggc
tccgtcgaagatttccgccgttgcggtttcaaaaacttttcctgtaacaaactttgtaag
aagcgtttagattgtaacaaacataactgctccgaaatctgtcatccaggcacgtgccct
ccttgccgtgcacgtgagacttaccgttgccggtgtggtaaaaaggaagaagagaaagat
tgttgtgaccgggattatcgctgcgaaaatgagtgtaaaaagttgcttaactgtggaaag
catgtttgtgaaagaggatgccacgggggagattgcggggagtgtccattgcaaggaaat
aggacatgtccttgcgggaaaagaatttatgaagggctgccctgtgatggggtggctcca
gtttgcggtgcaacttgtaataagctgttgaattgtggtttccataggtgtcccgagcgg
tgtcacaaaggatcttgtgtggagacttgtaggactatggttaagaaggcgtgccggtgt
ggaggattgaagaaagaggttccttgctatcaagatttgtcatgtgaaaggaagtgtttg
agaatgagggattgcggacgccatgcttgtaaacgtcgttgttgtgatggagattgtccg
ccatgttcagaggtttgtgataagaggcttcgctgcaagaaccacaaatgccctgctcct
tgccatagaggtgcctgtgctccctgtccaattatggtgacaatttcatgtgcatgtggt
gagacacactttgaggttccttgtggaactgaaatggatcacaagcctcctaaatgccgt
aaattatgtaagatagctcctttgtgcaggcatgcatcaaccagtaagccgcacagatgc
cactatggagcttgccccccatgtcgggcaccttgtgaagaagaatatccatgtggtcat
aagtgcaacttaaggtgtcatgggccaagacctcctcccaatccagaattcacattgaaa
cccaagaaaaagaaatcaaatcatcagacagagtgcactccaggcaccccttgccctcct
tgcccagaacttgtttggagaccatgtgttggcgagcactttggagcagagaggatgatg
gtttgctccaatacaacacgattttcttgtgataatttatgtggaaatcttcttccttgt
ggcaatcattattgtacaaaaacttgccatcccctggagacccagccttcttcatcagga
catcagaaaagaagtgaatcttgtgaagtgtgtaatctcccttgccagaaggtgaggatg
cctaaatgttcgcacccctgctccctaccttgtcatcccggagaatgccttccttgcaaa
gtgctcgtgaaacggtcgtgtcactgtggtgcaatggtccatgcatttgagtgcatccat
tataacaatttatctgaaaaggatcaagtggctgctcgctcatgtgggggcccttgccat
agaaagctgcctaactgtacgcatttatgtcctgaaatatgccatgttgataaatgccca
gcccctgataagtgcagcaaaaaggttactgttcgctgtaaatgccaaaccttgaagaag
gaatggatatgccaagatgttcaggctgcatatcgtgatactggtaatgaccccaaagat
ataccaaagaatcagtttgggcttggacttctgccttgcaattcagattgtaagagcaaa
gtacaggaggttgagtcagctctacaattgcgtaaacctaaggttctggagaaaaaagag
ccagaaaacgaaaagcatgggccaaagcgcagaaaaaggcgggatcggattcaagagggc
aagcaagtttcaagatttcaggaatttgttgccagcgtgaagcggctgcttttatttatc
atcatcggagcagttctgattgcagtcacatattacagttacaaaggtctcttacaactc
tcagattggatgaatgaagttgaactgcaacgagcaagacgaagacgttcacgattctga
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