Gossypium arboreum (tree cotton): 108484141
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Entry
108484141 CDS
T05776
Name
(RefSeq) RNA-binding protein 1
KO
K14411
RNA-binding protein Musashi
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108484141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108484141
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
108484141
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_Nup35
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
108484141
NCBI-ProteinID:
XP_017643307
UniProt:
A0A0B0PTH9
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Position
6:complement(140658558..140660886)
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AA seq
393 aa
AA seq
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MESDQAKLFVGGISRETSEAILTDHFSKYGNVVSSVVAKDKNTKSPRGFGFVLFSEPSSA
DKALQATHVILGRTVEVKKAIPRSEQNQIQRQQHHNSNEQPSRNGGSEPVDSNNHFRTKK
IFVGGLSASLTEEEFKNYFERFGRITDVVVMHDSLTNRPRGFGFVTFESEEAVENVMQKS
FHELSNRLVEVKRAVPKEGNNGGNNGYNMKAGVVPVSPYNGFQPFDYVPSSPGYGMFPGY
APLIGYNTIDGYVYGSGVYGNGYPTVGYGRIGYGVPSVTPRGSFYAPVMLGPRLCPPPYG
TASAYPPCMNNGVGLVGTVTGGFNGITGNAVDGKSNQVNDDSRDPPTNAMPPQTEGANYD
GEGLKECNAGASSEQDQKHHDGELEPLYVDASR
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggaatctgatcaagccaaactgtttgtgggagggatatctcgggagacaagtgaagct
attctcacggatcatttcagcaaatacggcaacgtcgttagctctgtcgtagctaaagac
aagaacaccaaaagccctcgtggtttcggctttgtgttgttctctgaaccttcttcagct
gataaagctcttcaagctacccatgtaattcttggtagaacggtagaagtgaaaaaggca
ataccccgaagcgaacaaaaccaaattcagcgacaacagcaccacaattcgaatgaacag
ccgagtaggaatggtggtagtgaacctgttgatagcaataatcactttaggactaaaaag
atcttcgtagggggcttatctgctagtctaaccgaggaagagtttaagaattactttgaa
agattcggtagaataaccgacgtagttgtgatgcatgacagcttgactaataggcctaga
ggattcgggtttgttactttcgaatcggaagaggctgtggagaatgttatgcagaagagt
tttcatgagttgagtaataggcttgtggaagtcaaacgtgcagtgccaaaagaagggaat
aatggtggtaacaatggttataacatgaaggctggtgttgtaccggtatcaccatataat
ggttttcagccttttgattacgttcccagtagtcctggatatggtatgttccctggttat
gctcctcttattgggtataataccattgatggatatgtttacggaagtggtgtttatggc
aatgggtacccaaccgttggatatggtaggataggttatggtgtcccttcagttactccg
aggggctctttttatgcccctgtaatgcttggaccaagactttgcccgccaccttatgga
actgcatctgcctatcccccttgcatgaacaatggggttggtctagtgggtacagtgact
ggtgggttcaatgggattactgggaacgcagttgatggaaaatcaaatcaagttaatgat
gactctcgagatccacctacaaatgccatgccacctcagaccgaaggagcaaactatgat
ggtgagggtttaaaggaatgcaacgccggtgcttctagcgaacaggatcagaaacatcat
gacggagaacttgagcctttatatgttgatgcttcaagatga
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