Gossypium arboreum (tree cotton): 108484174
Help
Entry
108484174 CDS
T05776
Name
(RefSeq) probable indole-3-acetic acid-amido synthetase GH3.1
KO
K14487
auxin responsive GH3 gene family
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108484174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
108484174
NCBI-ProteinID:
XP_017643356
LinkDB
All DBs
Position
3:2845360..2847772
Genome browser
AA seq
598 aa
AA seq
DB search
MAVDSAISSPLGPPACEKDAKALRFVEEMTRNADSVQERVLSDILTQNSQTEYLRRFKLN
GATDRDSFKSKLPVIAYEDLQPEIQRIANGDRSAILSAHPISEFLTSSGTSAGERKLMPT
IKEELDRRQLLYSLLMPVMNLYVPGLDKGKGLYFLFVKSETRTPGGLLARPVLTSYYKSE
HFKTRPYDPYNVYTSPNEAILCPDSFQSMYTQMLCGLQDRHQVLRVGAVFASGLLRAIRF
LQLNWRQLSQDIETGTLNQKVTDPSLRECMGKILKPDPELARFVRHECSKESWEGIITRI
WPNTKYLDVIVTGAMAQYIPTLDYYSGGLPKACTMYASSECYFGLNLNPMCKPSEVSYTI
MPNMAYFEFLPHDPNSAGFTRDSPPKLVDLVDVEIGKEYELVITTYAGLCRYRVGDILRV
TGFHNSAPQFHFVRRKNVLLSIDSDKTDEAELQKAVENASRLLREFNTSVVEYTSYADTK
TIPGHYVIYWELLVKDAANSPTDDLLKQCCLAMEESMNSVYRQGRVADNSIGPLEIRVVK
NGTFEELMDYAISRGASINQYKVPRCVNFTPIMELLDSRVVSTHFSPALPHWTPERRR
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcgattcagcaatctcgtctccgttgggtccgccggcatgcgagaaagatgca
aaagctttgcgattcgtcgaggaaatgactcggaacgccgactcggttcaagaacgagtt
ttgtccgatatcctaactcaaaactcccaaaccgagtaccttcgaaggttcaaactcaat
ggggcaaccgatcgtgactcgttcaaatccaaacttccggtcattgcttacgaagacctt
cagcctgaaatccaacgtatcgctaatggtgaccgttccgccattttatcagctcaccca
atctcagaattcctcaccagctccgggacttcagctggtgagaggaaactgatgccaact
attaaagaagagctagatcgccgccagttgctctacagtttgctcatgccagtgatgaat
ctttatgtgccgggtttagacaaaggcaagggcttatatttcttgttcgtcaaatcggaa
acaagaaccccaggtggtctgttagctcgaccggtgctgaccagttactacaagagcgag
catttcaagacccgaccgtacgacccatacaacgtttacaccagccccaacgaagccatc
ctttgtcctgattccttccaaagcatgtatacacagatgctttgtggtctccaagaccgc
catcaagtcctccgagtcggcgcggtgttcgcctccggtctcctccgtgcaatcaggttc
cttcagcttaattggcgacaactctctcaggatatcgaaacgggtaccttgaatcaaaag
gtaaccgacccgtcattaagggaatgtatgggtaagatcctgaaacccgacccggaacta
gctcggtttgtccgccatgaatgttcgaaggaaagctgggaagggattattacaaggatt
tggcctaatactaagtacctcgacgttatagtaacgggtgctatggcacagtatattccg
accttggattattacagtggtgggttacctaaggcatgtacaatgtacgcttcatcggaa
tgttattttgggttaaaccttaaccccatgtgcaaaccatcggaagtttcgtatactatc
atgccgaacatggcgtatttcgagttcttacctcatgatcctaactcagctgggttcact
cgtgactcacctcctaaactcgttgaccttgttgacgtggaaatcgggaaagaatacgag
ctcgtaatcacgacctatgccggattatgcaggtaccgagtcggcgacattttacgagtc
acggggttccataactcagccccacagttccatttcgtgaggaggaagaacgtgttgctc
agcatcgactcggacaaaaccgacgaagccgagttacaaaaagccgtcgagaacgcttct
cggctcctccgagaattcaacaccagcgtcgtcgagtacacgagttacgccgacaccaaa
accatccccggccactacgttatatactgggaattgttggtgaaagacgccgcgaactcc
cccaccgacgaccttttgaaacagtgctgtttagcaatggaagaatcgatgaactcggtg
taccgacaaggccgagttgctgacaactcaatcggcccactcgaaatccgggtggtgaaa
aacggcacgtttgaagaactcatggattacgccatatcaagaggagcttccattaatcaa
tacaaggttccaaggtgtgttaacttcacacccatcatggagttactggactctagagtg
gtatctacacattttagcccagctttaccacattggacccctgaaaggcgaagatga
DBGET
integrated database retrieval system
