Gossypium arboreum (tree cotton): 108484224
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Entry
108484224 CDS
T05776
Name
(RefSeq) RNA polymerase sigma factor sigC-like
KO
K03093
RNA polymerase sigma-I factor
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gab03021
]
108484224
Transcription machinery [BR:
gab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
108484224
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
108484224
NCBI-ProteinID:
XP_017643422
UniProt:
A0A0B0MQ77
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Position
6:complement(108665649..108671068)
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AA seq
556 aa
AA seq
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MGFRLNLKGVFPVPSHFLPNYSPSRLPSSSSSSVRGKEASFNSTRLSLISDEGVFLSKDP
PKAYASPAALQTLENGCSDIEEKVNIDKGPQSQNCSHVMVGKSHEPIRGNRSSSCASPQT
CKASRYNVLMDNLHVLEETFVDSDVLRLESEILVQLGRLGALNLFNIFLSHKPSNIFDLS
DDAANSLECIMNGLVDSEKDKIIVSSRKNKQRRKRREKAVEATTISTQLPPTNTLHGRYQ
KPKRSSPKRMSDSRKGRSAVARNEVEMSKGVKVVANLERIRATLEEETGRIVSLSCWAEA
AKLTEKVLQQHLHYGWYCRDELIRSTRSLVLYFARNYRGLGIAHEDLIQAGSIGVLQGAE
RFDHTRGYKFSTYIQYWIRKSISRMVARHARGIQVPCTLSRAIVQIQKARKALSKSHGKY
PEEDEIAKITGLSLSKIRSANKCFRVVGSIDQKIGDYINAKYLEFIPDASICSPEKTVMR
QHMKEDINDLLNGLEKRERQVMVLRYGLTGSPPKSLEEIGRLFCVSKEWIRRIEMKAMAK
LRDKETCRNLSHYLDS
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgggttttagattgaatctcaaaggtgttttcccagttccttctcattttcttcccaat
tattcaccttccaggcttccttcttcttcttcttcttcagttagagggaaggaggcttct
tttaactcaaccaggctgtctttaatatctgatgaaggtgtgtttctatcaaaagatcct
ccaaaagcatatgcttcacctgcagctctgcaaacattagaaaatggttgctcagatatt
gaagaaaaggtaaatattgacaagggaccacagtcacagaattgttcccatgttatggtt
ggtaaatcgcatgaaccaattagaggaaacagatcttcctcgtgcgcaagcccacagaca
tgcaaggcatcacgttataacgtgcttatggataatctccacgttttggaggagacattt
gttgattcagatgtgctaagattggagagcgaaatcctagtacaactaggaaggcttgga
gctctaaatttattcaatatctttctgtctcataaaccttcaaatattttcgacctatct
gacgatgctgctaatagtttagagtgtattatgaatggtttggtggatagtgaaaaggac
aagataattgttagctctagaaaaaataaacaacgaagaaaaagaagagaaaaagcagta
gaagctactacaatttctacacagttgccacctaccaacaccctacatggacgttatcaa
aagcccaaacgttcttctcctaaaagaatgtcagactctagaaagggaagatcggcagtt
gctaggaatgaagtagaaatgtcaaagggtgttaaggtggttgcaaacttggagaggatt
agagcaactttggaagaggaaaccgggagaattgtcagcttgagttgctgggcagaagca
gccaaacttactgagaaggtgctgcaacagcatttgcattatggttggtactgcagggat
gagttaataaggagtacacgctccttagtcctctactttgcaaggaactataggggtttg
ggaatagcccacgaagacttaatccaggcgggaagtataggagtcctccaaggtgcagaa
aggtttgaccacacaaggggatacaaattttctacctatatacagtactggataaggaaa
tcaatttcgagaatggtggcacggcatgctagagggattcaagttccttgcacgttaagc
agggcgatagtacagatacagaaagctaggaaggcccttagcaaaagccatgggaaatac
ccagaagaggacgaaattgccaagattacgggtctttctttgtccaaaatcaggtcggct
aataaatgcttcagagttgtgggttcaattgaccagaaaattggagattatatcaatgca
aaatatttggaatttattccagatgcatcaatatgtagcccggagaaaactgtgatgagg
cagcacatgaaggaagatatcaatgatcttttgaatggtctggaaaaaagagagaggcaa
gtgatggttctacgctatggactcacgggttctcccccgaagtcactcgaggagattggg
aggcttttttgtgtgagcaaagagtggataagaaggatagagatgaaagcaatggcgaaa
ttgagggataaagaaacctgcagaaatttaagccactatttggactcttag
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