Gossypium arboreum (tree cotton): 108484681
Help
Entry
108484681 CDS
T05776
Name
(RefSeq) probable vacuolar amino acid transporter YPQ1 isoform X1
KO
K23678
solute carrier family 66 (lysosomal lysine-arginine transporter), member 1
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108484681
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gab02000
]
108484681
Transporters [BR:
gab02000
]
Solute carrier family (SLC)
SLC66: Lysosomal lysine-arginine transporter
108484681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PQ-loop
RBD
Motif
Other DBs
NCBI-GeneID:
108484681
NCBI-ProteinID:
XP_017644051
LinkDB
All DBs
Position
12:complement(16919245..16922487)
Genome browser
AA seq
386 aa
AA seq
DB search
MSRSQAYCVKENKPCNVWVERYFKDCLCNLKDDLSFGFGLTSLVCWGVAEIPQIITNFKT
KSSHGVSLLFLLTWVVGDVFNLVGCLLEPATLPTQFYTALLYTASTVVLVLQSIYYDYIY
RWWKCRRIIADNMVEDEKKPLKPGKPGSGIPIPKASQKPNPRREYYYMSARSLAGSGTPP
IGTYMRAAKSGPSAMELDSGSSSEDESAHVSSKKSATQPRPIPRSVANYGTFLAASINLP
LGSRAWMEARSGFTSRRLLHSLLQEHSMIHSAFGQWLGWLMAAIYMGGRIPQIWLNIKRG
SVEGLNPLMFIFALIANATYVASILVRTSEWENIKPNMPWLLDAAVCVALDLFIILQYVY
YSFFRETVNSDAEDYGDDHMDASKRI
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggtctcaagcttactgtgttaaggaaaacaagccctgcaatgtgtgggttgag
agatatttcaaagactgtctttgcaatctaaaggatgatttgtcttttggttttgggtta
actagtcttgtctgctggggagttgcagagattcctcaaatcatcaccaacttcaaaacc
aagtccagccatggagtttcccttctttttcttctcacttgggttgttggtgatgtgttc
aaccttgttggatgccttctggaacctgcaacgttgccaactcagttctacacagctctt
ctctatacagcgagtactgtggttctagtactgcaaagtatatactatgattatatctat
aggtggtggaaatgtagaaggatcattgctgacaacatggttgaagatgagaaaaaacca
ttgaagcctgggaaacctggctcaggcattcccattcctaaggcctcacaaaaacccaat
cctcgcagggagtattactacatgtcggctagatctttggctggcagtggcactccacct
atcggaacatatatgagagcagctaaaagtggcccttcagctatggaactcgacagtggt
tcctcctcagaagatgaatcagctcatgtttcatccaaaaagtccgccactcaacctagg
ccaatcccaagatccgttgcaaattatggtacatttctggctgcctcaatcaacttgcct
ttaggaagtagggcatggatggaagcaagatctggctttaccagtcgaagactattacat
tctctgttgcaggaacacagtatgatccacagcgcctttgggcagtggctgggatggcta
atggccgccatatacatgggcggccgaatccctcagatatggttaaatatcaaaagaggc
agtgttgagggcttgaatcctctcatgttcatctttgcactgatagctaatgctacatat
gtggcaagtattctagtgagaaccagtgaatgggaaaacattaagcctaacatgccatgg
ctgctggatgctgcagtttgcgtggcactcgacttatttatcatattacagtatgtgtat
tactcctttttcagagagacagttaacagtgatgcagaagattatggagatgatcacatg
gatgcaagtaaaagaatctaa
DBGET
integrated database retrieval system
