Gossypium arboreum (tree cotton): 108484808
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Entry
108484808 CDS
T05776
Name
(RefSeq) cell differentiation protein rcd1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108484808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108484808
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
108484808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
SYNRG_C
CFA69_ARM_rpt
Motif
Other DBs
NCBI-GeneID:
108484808
NCBI-ProteinID:
XP_017644196
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All DBs
Position
7:complement(12500466..12504452)
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AA seq
307 aa
AA seq
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MVSSAAAPATSNPPARVRYLIRGLASEETREQSLDVLCKNRLAYDNLAVLLWNSFGIMSV
LLKIITSAYRPLLSDGLTENVVTQVCNAIALFQCVASHPDTRIPFIRATMPVYLYPFLNT
MSNERSYECLRITSLGVIGSLAKVEDPEVIEYLLSTQIFPSCLRCMEVGKTLSRTVSTFI
IYRILLSEKGLKYCFVLAERYLSVSQCLGKLVENLSEDDAENLPQLLKNIIGCYLRLSEN
ERTRPQLSSYVPWKLLDHKYANIVRSDPEALADLRQLVCNLRTSKSCTTHCTDDQPASSD
SPGSSIP
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggtttcaagtgcggctgctccagccacttccaaccctcctgctagagtcagatatttg
attcgagggcttgcttctgaagaaacccgagagcaatcacttgatgttctttgcaagaat
agactggcttatgacaatttggcagtgctgttatggaattcttttggtattatgagtgtc
cttttgaagataataacttcagcttaccgtccactgttatccgacggccttactgaaaat
gttgtaacacaagtctgcaatgctatagcccttttccagtgtgtagcttctcaccccgat
acaaggattccatttatcagagctacaatgccagtgtatctttatcccttcttgaacacc
atgagcaatgaaaggagctacgaatgtctaaggattaccagcttaggtgtgatcgggtcc
ttagcaaaggtagaggatccagaagtgatagagtacctgctttcaactcaaatatttccc
agttgcctacgctgcatggaggttggcaaaacattgtcacgaacagtgtccacatttata
atttacagaatcttactaagtgagaaagggctaaagtactgtttcgttcttgctgaacga
tatctctcagtatcccaatgtttgggaaaattggttgaaaaccttagtgaagatgatgca
gaaaatttgcctcagctcctcaaaaacatcatcggatgttacctcaggctctccgaaaac
gaaaggacaaggccacaattgtcgagctacgttccatggaagttgttagatcataaatat
gcaaacatcgttcggagtgatccagaggcccttgctgacctacgacaattggtttgcaat
ttaaggacaagcaagagttgtacaacccactgtaccgacgaccaaccagcgagcagcgac
tcacccgggtcgtccattccatga
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