Gossypium arboreum (tree cotton): 108485867
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Entry
108485867 CDS
T05776
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108485867
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108485867
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
108485867
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
108485867
NCBI-ProteinID:
XP_017645202
LinkDB
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Position
7:complement(8895329..8898679)
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AA seq
475 aa
AA seq
DB search
MSENGKLFIGGISWDTNEERLKEYFSSFGEVVEAMIMKDWTTGRARGFGFIVFSDLAVAE
KVIKEKHNIDGRMVEAKKAVPRDDQNIMSRSTSSIQGLPSLCRIRKIFVGGLASTVTESD
FKKYFNQFGNVTDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKSFHELNGKMVEVKRA
VAKELLPGPCRSPLSGYNYGLNSVNNFLSGCTQGYTPSNIRSFGLRMDGRFTTVPGGRSG
FPPFGSGYGMGMNFEPGLNPSFGNSANFSSNMNHGRGLNPYYIGNVNRFGSPIGYDGSTE
GNTSFFSSVTQNLWGNGGLNYNTNASSSNAYIGSGSVSIGGSAFGNSGINWSSAIANQDE
GSNVSNNSVHFAYGTADDSFRLGIVGYGRNNGTNVAPTSSYATSNFGYDVAFTDLYGGAS
AYGDITWRSSTFKRDGSGSFGYGLGSATYVSGKNSPGYVSSHKVNKRQASRGIAT
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagaatggtaagctatttattggtgggatatcttgggataccaatgaagagcgt
cttaaggagtatttcagtagttttggtgaagtggtagaggcgatgatcatgaaggattgg
accacaggacgtgctcgaggtttcggtttcattgttttctctgacctagcagttgctgag
aaagtcatcaaggagaaacataatattgatggtagaatggttgaggcaaaaaaagcagtt
cctagggatgaccagaacattatgagtagaagcactagtagcatccaaggtttacctagt
ctatgccgcataagaaagatttttgttggaggtttagcatcaacagtcacagagagtgac
tttaagaagtattttaatcagtttgggaatgtcacagatgttgtagtgatgtatgatcac
aacactcaaaggcctaggggtttcggattcattacttatgattcagaagaggcagtggac
aaagtgttgctaaaaagtttccatgaacttaatggtaaaatggtcgaggttaaacgagca
gtagctaaagaattattgcctggcccttgtcgtagtcccctcagtggatataactatggt
ctgaatagcgtcaacaactttcttagtggctgcactcagggatatactccaagcaatatt
cgaagctttggacttaggatggatggtagatttactacagttcctggtggtcgaagtggt
tttcctccttttggttctggttatggaatgggcatgaactttgagcctgggttaaaccca
agttttggaaatagtgcaaattttagtagtaatatgaaccatggacggggattgaatcct
tactatattggtaatgtaaatagatttggtagccctattgggtatgatggaagtactgaa
ggtaatacttccttttttagctcagtgactcaaaacctttggggaaatgggggactcaat
tataacacaaatgcttctagttccaatgcatatataggatctggaagtgttagtatagga
ggaagcgcctttggaaatagtggaattaattggagttctgcaattgccaatcaagacgag
gggagtaatgtttctaacaatagtgtgcatttcgcttatggaactgctgatgacagcttt
aggttagggattgtagggtatgggagaaataatgggaccaatgtggcgccaacatcatca
tatgcaacatcaaattttggttatgatgtagcctttacagacctttatggtggtgcttca
gcttatggggatataacttggcgatcatcaacatttaagcgagatggttctggttccttt
ggctatggacttggtagtgccacttatgtttcaggcaaaaattctcccggctatgtcagt
agtcataaagttaataagagacaagcaagtagaggaatcgctacctag
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