Gossypium arboreum (tree cotton): 108486196
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Entry
108486196 CDS
T05776
Name
(RefSeq) oligouridylate-binding protein 1-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108486196
03041 Spliceosome [BR:
gab03041
]
108486196
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
108486196
Spliceosome [BR:
gab03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
108486196
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
Motif
Other DBs
NCBI-GeneID:
108486196
NCBI-ProteinID:
XP_017645578
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All DBs
Position
6:complement(120900082..120906309)
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AA seq
417 aa
AA seq
DB search
MQQQRLKQQHALMQQALYHNPSLMSGPQIEPILSGNLPPGFDAATCRSVYVGNIHPHVTE
PLLQEVFLSTGPIEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGRHLFGQPIKVNWAY
ASNQREDTSGHHNIFVGDLSPEVTDATLFACFSVYSSCSDARVMWDQKTGRSRGFGFVSF
RNQQEAQSAINDLNGKWLGSRQIRCNCAAKGATSNDDKSGLDAKGVVEPTNGTSEEGQEK
TNDDAPENNPQYTTVYVGNLAPEVTSVDLHRLFHTLGAGTIEDVRVQRDKGFGFVRYSLH
TEAALAIQMGNARILCGKPIKCSWGSKPTAPGTSSAPLPPPAAAHMPGFSAADLAAYERH
MAMSKYGGAQVMSMMHPQGQHALKQAAMGMGVAAAGQAIYDGGYQNVATTQQLMYYQ
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcaaaggctaaagcagcaacatgctctgatgcaacaggctttgtaccacaat
cccagtctcatgagtggtcctcagatagaacctatcttgagtgggaatcttcctcctggc
tttgatgcagctacttgccgcagcgtatacgtgggaaatattcacccccacgtcacggaa
ccccttctgcaagaagtctttctgagtactggtcccattgaaggatgcaaacttattaaa
aaagataagtcatcgtatggttttgtggactactttgatcgcagatcagctgcccttgct
attgttactctaaatggaaggcatctatttgggcaacctattaaagttaattgggcatat
gctagcaatcagagggaggatacatcaggtcatcacaacatttttgttggtgatctcagc
cctgaagttacagatgctactttgtttgcatgcttttctgtgtactctagttgttcggat
gctagggttatgtgggatcaaaaaactggccgctcgagaggttttggttttgtttctttc
aggaaccagcaggaagcccagagtgcaattaatgacttaaatgggaagtggcttggaagt
agacagatccgttgtaactgtgctgcaaaaggtgccacttccaacgatgacaaatcaggt
ttggatgccaaaggcgttgtagagccgacaaatggaacctctgaagaaggtcaagagaag
actaatgatgatgctccagagaacaatcctcagtataccacggtttatgtgggcaatctt
gccccagaggttacatcagttgatctccacaggcttttccatacccttggagcaggaact
attgaagatgttcgcgtgcaacgagataaaggttttggttttgtgagatacagtttgcat
actgaagcagctttagctatacagatgggaaatgctagaattctgtgcggtaaaccaatt
aagtgttcatggggtagcaagcctactgcaccaggaacaagctctgcccctttgcctcca
ccggctgctgcacatatgcctggtttttcagctgctgatctggctgcctatgaacgacat
atggcaatgagtaaatatggcggtgcacaggtaatgagtatgatgcatccacagggtcag
cacgcccttaagcaagcggccatgggaatgggtgtggctgcagctggtcaagcaatctat
gatggtggataccaaaacgttgcaacaactcagcagcttatgtactatcagtaa
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