Gossypium arboreum (tree cotton): 108486202
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Entry
108486202 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108486202 isoform X1
KO
K20222
importin-5
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108486202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gab03009
]
108486202
Ribosome biogenesis [BR:
gab03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
108486202
Pre-60S particles
108486202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
Importin_rep_4
Importin_rep_6
HEAT_2
HEAT
HEAT_EF3_N
TOR1L1_N
MMS19_C
IFRD
Vac14_Fab1_bd
Cnd1
Adaptin_N
Arm
DUF577
ARM_ARMC5
CEP104-like_TOG
HEAT_IPO9_c
IBN_N
TPR_TNPO3_IPO13_3rd
Htt_N-HEAT_1
Phasin_2
TPR_26
Motif
Other DBs
NCBI-GeneID:
108486202
NCBI-ProteinID:
XP_017645591
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All DBs
Position
6:complement(94900826..94911886)
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AA seq
1109 aa
AA seq
DB search
MDQQSQLALILGPDPIPFETLVSHLMSSSNEQRSHAEALFNLCKQSDPDALCLRLAHLLQ
VCTQPETRAMAAILLRKLLTRDDSYIWPRLNISTQSSLKSVLLSQIQVETTKNLSKKLCD
TVAELASSILPENGWPELLPFMFQCVSSDSPKLQESAFLIFAQLSQYIGDVLTPFIKDLH
TVFLRCLSESSNADVKIAALNAVINFIQCLTSSSDRDRFQDLLPAMMRTLTEALNNGNEA
TAQEALELLIELAGTEPRFLRRQLVDVVGSMLQIAEAESLEEGTRHLAIEFVVTLAEARE
RAPGMMRKLPQFISRLFAILMRMLLDIEDDAAWHTAESEDEDAGETSNYSVGQECLDRLA
ISLGGNTIVPVASEQLPAYLAASEWQKHHAALIALAQIAEGCAKVMIKNLEQVVSMVLNS
FHDSHPRVRWAAINAIGQLSTDLGPDLQNQYHQRVLPALAGAMDDFQNPRVQAHAASAVL
NFSENCTPEILTPYLDGIVSKLLVLLQNGKQMVQEGALTALASVADSSQEHFQKYYDAVM
PYLKAILVNATDKSNRMLRAKSLECISLVGMAVGKEKFRDDAKQVMEVLMSLQGSQMETD
DPTTSYMLQAWARLCKCLGQDFLPYMSVVMPPLLQSAQLKPDVTITSADSDNDIEDSDDE
SMETITLGDKRIGIKTSVLEEKATACNMLCCYADELKEGFFPWIDQVAPTLVPLLKFYFH
EEVRKAAVSAMPELLRSAKLAVEKGMAQGRNETYVKQLSDYTIPALVEALHKEPDTEICA
SMLDALNECIQISGPLLDESQVRSIVDEIKQVITASASRKRERAERAKAEDFDAEEGELI
KEENEQEEDVFDQVGEILGTLVKTFKASFLPFFDELSSYLTPMWGKDKTAEERRIAICIF
DDVAEQCREAAIKYYDTYLPFILEACNDENPDVRQAAVYGLGVCTEFGGPVFKPLVGEAL
SRLNAVIRHPNALQPENVMAYDNAVSALGKICLFHRDSIDATQIVPAWLNCLPIKGDLIE
AKVVHEQLCSMVERSDSEILGPNHQYLPRIVAVFAEVLCGKDLATEQTASRMVNLLRQLQ
QTLPAATLASTWSSLQPQQQLALQSMLSS
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atggaccagcaatcgcagctcgccctcatcctaggacctgacccgattccatttgaaacc
ctagtctcccacttgatgtcatcatcaaacgaacaacgttctcacgctgaggccttgttt
aatctatgcaagcaatcggaccctgacgccctctgccttcgcctcgcccaccttctccaa
gtctgcactcagcccgagactcgcgccatggcagctattctcctccgtaagttgttgacg
cgtgacgactcttatatctggcctcgcctcaacatttctacacagtcttccctcaaatcc
gtgcttctgtctcaaatccaagtggaaaccaccaaaaatttatctaaaaagctgtgcgat
actgttgcggagcttgcttccagtattttgccggagaatgggtggccagagctcttgccg
tttatgtttcagtgtgtctcttcggattcccctaaattacaggagtctgcttttttgata
tttgcgcagctgagtcaatatattggggatgtgttgactccttttataaaggatctacac
actgtgttcttgaggtgcctgagtgaaagttctaatgccgatgtcaaaattgctgcgttg
aatgcggtcatcaactttattcagtgtttgaccagctcatccgatcgggataggtttcag
gatcttttgccagcaatgatgaggaccttgacagaggctttaaataacgggaatgaggcc
actgctcaggaggcacttgagttgttgatcgagttggcaggtaccgagccacggtttctt
aggaggcagcttgttgatgtagtgggttcgatgctgcagattgcagaggcagaatctctt
gaggaagggacacgtcatttggcgattgaatttgtggtgactttggcggaagcaagggag
cgtgctcctggaatgatgcggaagttgccgcaatttattagtaggttatttgcaatattg
atgagaatgctgttagatattgaggatgatgcagcatggcacacagcagaatctgaggat
gaggatgctggagagaccagcaattacagtgtcggacaggagtgtttggatcgtttggca
atttccttaggtgggaacacaattgttcctgttgcatctgagcagttgcctgcttatttg
gctgcttctgagtggcaaaagcatcatgctgcactaattgcccttgcgcagattgctgag
gggtgtgccaaggttatgattaaaaatctggaacaagtggtttccatggttttgaactca
tttcatgattctcatcctcgtgtaaggtgggcagctattaatgcaattgggcaattgtct
accgacttaggacccgatttgcaaaaccaatatcaccaaagagtattgcctgcattagct
ggcgctatggatgattttcagaatccacgagtacaggcccatgctgcgtcagctgtactc
aactttagtgagaactgcactccagaaattttaacaccttacttggatggaatagtcagc
aaattgcttgtacttttacagaatgggaaacaaatggtgcaagaaggtgccttgactgct
ttggcatcagttgccgactcatctcaggagcatttccaaaaatactatgatgcagttatg
ccttacctgaaagcaatcttggtaaatgctactgacaaatctaatcgtatgctacgtgcc
aaatccctggagtgtattagtcttgttggaatggctgttggaaaagagaaattcagagat
gatgctaagcaggttatggaagtgcttatgtcattgcaaggatcccaaatggaaacagat
gatccaacgacaagttacatgctgcaagcatgggctagactctgcaagtgtttgggacaa
gacttcctcccttacatgagtgttgtcatgcctccccttcttcagtctgctcagcttaag
ccggatgtaactattacatctgcagattcagataatgacatagaggactccgatgatgaa
agtatggaaaccattacgcttggggacaaaagaattgggatcaagacaagcgttctggag
gagaaggctacagcatgtaacatgctatgttgctatgccgatgagttgaaggaagggttt
tttccatggattgatcaggttgctccaactttagttcctcttcttaaattttatttccat
gaggaagttagaaaagctgctgtttcagccatgccggagttattgcgttctgcaaaatta
gctgtggagaagggaatggctcaagggcgtaatgagacctatgtgaagcaattgtctgat
tacactattccggctcttgtggaggcattacataaggaacctgatacagaaatatgtgca
agcatgttggatgcattgaatgaatgcatacagatctctggtccacttttagatgaaagc
caggttagatctatcgtggatgagataaaacaagtaatcacagctagtgcaagcaggaaa
agggagagagctgaaagagccaaagctgaagactttgatgctgaggagggagaattgatt
aaagaggagaatgagcaagaggaagacgtttttgaccaagtgggagaaatcttgggaact
ttggtcaaaacatttaaagcctctttcttgcctttctttgatgagctatcttcatatctt
acacctatgtgggggaaagataagactgctgaagaaagaagaattgctatttgtattttt
gacgatgttgctgagcagtgccgtgaggcagctataaaatattatgatacatatcttcct
ttcatattggaggcttgcaatgatgagaatccggatgtgcgacaggcagcggtgtatgga
ctgggtgtttgtacagaatttggtggacctgtatttaagccgcttgtaggagaggctcta
tcaaggttaaatgctgtaatccggcatcccaatgctttgcaacctgaaaacgtaatggca
tatgataatgctgtttctgctttaggaaaaatatgcctgttccatcgcgacagtattgat
gcaactcagattgttcctgcatggttaaactgcttgccgataaagggtgatctgatagaa
gccaaagttgttcatgaacaactttgttcaatggtagagaggtcagacagtgaaattttg
ggtcccaaccatcagtatcttcctaggatagttgcagtgtttgctgaggttctatgtggt
aaggatctagctacagagcaaactgcaagtaggatggtgaatttactgaggcagcttcag
caaactttgccagcggcaacattggcctcaacttggtcgtccttgcagccacaacaacag
cttgccttgcaatccatgctctcctcatag
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