Gossypium arboreum (tree cotton): 108486212
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Entry
108486212 CDS
T05776
Name
(RefSeq) coatomer subunit beta-1
KO
K17301
coatomer subunit beta
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108486212
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gab04147
]
108486212
Membrane trafficking [BR:
gab04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
108486212
Exosome [BR:
gab04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
108486212
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT_2
HEAT
Cnd1
Coatomer_g_Cpla
Alpha_adaptinC2
Motif
Other DBs
NCBI-GeneID:
108486212
NCBI-ProteinID:
XP_017645606
UniProt:
A0A0B0NP68
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All DBs
Position
6:92427373..92432774
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AA seq
948 aa
AA seq
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MEKSCTLLIHFDKGTPAIANEIKEALEGNDVPAKIDAMKKAVMLLLNSETLTQLFITIVR
YVLPSEDHTIQKLLLLYLEIIEKTDLKGRILPEMILICQNLRNNLQHPNEYIRGVTLRFL
CRLNETEIIEPLIPSVLQNLEHRHPFIRRNAILAVMSIYKLPQGEQLLVDAPEMIEKVLS
TEQDPSAKRNAFLMLFNCAHDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNRGEK
GKYIKIIISLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIVL
DRLNELKSSHRDIMVDLIMDVLRALSSPNLDIQRKTLDIVLELVTPRNINEVVLLLKKEV
MKTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLMMDFLGDSNVASAIDVIVFVR
EIIETNPKLRVSVITRLLDTFYQIRAARVCSCALWIIGEYCLSASEVESGIATIKQCLGE
LPFYSVSEEAEATDASKKTPQTNSITISSRRPAILADGTYATQSAASETAFSPPTIVQGS
LTSGNLRSLLLTGDFFLAAVVACTLTKLVLRLEEVQPSKVEVNKATTQALLIFVSMLQLG
QSPVLPHPIDNDSCDRIVLCIRLLCNTGDEIRKIWLQSCRQSFVKMLSEKQLQETEELKA
KAQVSHAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGEFVKDPDDANKLNRILQL
TGFSDPVYAEAYVTVHHYDIVLDITVINRTRETLQNLCLELATMGDLKLVERPQNYTLAP
ESSKQIKANIKVSSTETGVIFGNIVYETSNVLERTVVVLNDIHIDIMDYISPAVCTDTAF
RTMWAEFEWENKVAVNTVIKNEKEFLDHIIKSTNMKCLTAPSALDGECGFLAANLYAKSV
FGEDALVNVSIEKQADGKLSGYIRIRSKTQGIALSLGDKITLKQKGGS
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggagaagtcttgtacacttcttattcactttgacaaaggaacaccagcaattgctaat
gaaattaaggaagcactcgaaggcaatgatgttcctgcaaagattgatgccatgaagaaa
gcagttatgcttttgttgaatagtgaaactctcacccagctttttattaccattgtcaga
tatgttttgccttcggaggatcacaccatccaaaaacttttgcttctatacttggagata
attgagaaaactgatttgaaagggaggatattacctgaaatgatcttaatatgccaaaat
ttgaggaacaatcttcaacatcctaatgaatatattcgtggtgtgaccttgagatttctc
tgccgcttgaatgagacagagatcattgagccactaatcccttcagttttgcaaaatctg
gagcatcggcatccatttattcgtaggaacgctatattggctgtcatgtcaatatataag
cttccacaaggcgagcagctcctggttgatgcacctgaaatgattgagaaggtcctttcg
acagagcaggatccatctgccaagcgaaatgcatttcttatgctatttaactgtgcacac
gatcgagccattaattaccttttgacccatgttgacagggtttccgaatggggtgaattg
cttcagatggttgtgttggagctgattcgtaaggtttgcagaacaaatcgtggggagaaa
gggaagtatattaagattattatatctttattaaatgccccctcaactgcagttatttat
gaatgtgctggcacccttgtttctctgtcatctgctcctactgctattagagctgctgca
aacacttattgtcagcttcttctttctcaaagcgataacaatgtgaagcttattgtgcta
gatcggctgaatgagctcaagtcttctcatagagatattatggttgatttgatcatggat
gtgcttagggcactttcaagtccaaatcttgacatccaaaggaagacacttgatattgtt
cttgagttagtaactccccgaaacatcaatgaagttgttcttttgttgaagaaggaagtg
atgaaaactcaaagtggagaacttgagaagaacggagaatacagacaaatgcttattcaa
gctatccattcctgcgcaatcaagttcccagaagttgcaagtacagttgtgcatctgatg
atggatttcttaggagacagtaatgttgcttcagctattgatgttatagtttttgttcga
gaaataattgaaaccaaccctaaacttagggtgtccgttataacacggttgttggacaca
ttctatcagattcgagctgcacgggtttgctcctgtgccctttggatcatcggagaatat
tgcctttctgcatctgaagttgagagtggcatagcaaccatcaagcagtgtcttggagag
ctgcctttctactctgtttctgaggaagcggaagctactgatgcttccaagaaaactcct
caaacaaactccattaccatctcctccaggagacctgctattcttgctgatggtacttat
gcaacccagagtgctgcatctgaaactgctttctcccctcctaccattgttcagggatca
ttgacttctgggaatctcagatctcttctcctcactggcgattttttcctcgctgcagtt
gttgcttgcacactgactaaacttgttctgagactggaagaggtacagccttcaaaagtt
gaagttaacaaagcaaccacacaggcattgctgatctttgtctctatgctgcaattaggg
caatctcctgttcttccacacccaattgataatgattcttgcgatagaattgttctgtgc
ataagattattgtgcaatactggtgatgagatcagaaaaatatggttgcagtcttgccgt
cagagttttgttaaaatgctttcagagaaacaattgcaagaaactgaggaattaaaggca
aaagctcaggtttctcatgcacaaccggatgaccttattgacttttaccatttaaagagt
cgaaagggtatgagtcagctggaattggaggatgaggttcaagatgatttaaaacgagca
actggagagtttgtcaaggatccagatgatgcaaataagctcaaccgcattcttcaactg
acaggatttagtgatccggtatatgccgaagcatatgtcactgtccatcactatgatatt
gttcttgatattactgttatcaaccgaaccagggaaacccttcagaatttgtgcttggag
ttggctactatgggtgatctgaaacttgtggagcgtcctcaaaattataccctagctcct
gaatctagcaagcaaataaaggccaacatcaaggtgtcttcaactgagactggagtcata
tttggcaacattgtatatgaaacttcaaatgtgcttgagagaacagtagttgttctgaat
gacattcacattgatatcatggactatatttctcctgctgtttgtacggatactgcattc
agaaccatgtgggcagaatttgagtgggaaaataaggttgctgtaaacactgtaattaaa
aatgaaaaggaattcctcgaccatattatcaagtcaactaacatgaagtgcctcactgca
ccatctgcgctagatggtgagtgtggattcctggctgcgaacttgtacgcaaagagcgtg
tttggggaggatgcgttggtaaacgtgagcattgagaagcaagctgatgggaaactgagt
gggtacatccggataaggagcaagacccaggggattgctttgagtctcggggacaagatc
actcttaagcaaaagggaggcagttga
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