Gossypium arboreum (tree cotton): 108486250
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Entry
108486250 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108486250 isoform X1
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108486250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gab03041
]
108486250
Spliceosome [BR:
gab03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
108486250
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
108486250
NCBI-ProteinID:
XP_017645692
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Position
6:11692460..11696183
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AA seq
567 aa
AA seq
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MLLWYNSRNCESEGGGKKMKAKREHGDSVDGERDLKRQRVVDSPSSPPEEPLVPYNDDED
DERRALNHIGSREEDGHRVESEEEDDDDEDDPYGLGSTLGRSNRQVEVRRDCPYLDTVNR
QVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVY
CLPDGYEINDPSLDDIRHVLYPRFSREQLEQLDKNKQWSRALDGSDYLPGMVGLNNIQKT
DFVNVTIQSLMRVTPLRNFFLIPENYQHCRSQLVHRFGELTRKIWHARNFKGQVSPHEFL
QAVMKASKKRFRIGVQCEPVEFMSWLLNTLHADLRTSKKSSSIVHKCFQGELEVVKETQS
KAIGEKKESDGEQNGALKITDGQIENNNVAAETYRMPFLMLGLDLPEPPLFKDVMEKNII
PQVPLFNILKKFDGEMVTTTVRPPARMRYRVTKLPQYFILHMRRFTKNNFFREKNPTLVN
FPVKNLELKDYIPLPAPTKENEKLRTKYDLIANVVHDGKPDEGFYRVFVQRKSEELWYEM
QDLHVSETLPQMVALSEAYMQIYEQQQ
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgctactgtggtataacagcagaaattgtgagagtgaaggagggggaaagaagatgaaa
gcaaaaagggaacatggtgatagtgtagacggggaacgggacttaaaacggcagagggtt
gtggattcaccatcttcacctcctgaagagccacttgtgccttataatgacgatgaagat
gatgaaaggagggcattgaatcacataggcagcagagaagaagatggtcacagagttgaa
agtgaagaagaagatgatgatgatgaagatgatccatatgggctaggatcaactctaggg
aggtcaaatcgccaggttgaagtgcgtagagactgtccttacctcgatactgttaaccgc
caggttctggattttgatttcgagaaattttgttcggtctctttgtcgaatttgaatgtg
tatgcgtgcctggtctgtgggaagtattaccaaggaagagggaagaagtcccatgcatat
actcatagtctagaagcaggacatcatgtctacatcaatcttcgaacagagaaggtgtac
tgtctccctgatgggtatgaaattaatgacccatcactggatgatattcgccatgttcta
tacccaaggttttccagagaacaacttgaacaacttgataagaacaagcaatggtctagg
gcacttgatggttcagattaccttcctgggatggttgggctgaataatattcaaaagact
gattttgtcaatgtcaccattcaatctttaatgagagttactcccttaagaaacttcttc
cttatccctgagaattaccagcactgtagatctcaacttgttcatcggtttggagaactc
acacgaaagatttggcatgctcgaaactttaaaggacaggtgagcccacatgagtttcta
caggcagttatgaaagcaagtaaaaaacggtttcgaataggcgtgcagtgtgaaccagtt
gaattcatgtcatggcttcttaacacattgcatgcagatcttagaacttctaagaaaagt
agcagcatcgtccataagtgctttcagggggaactggaggttgtgaaagagactcagagc
aaagctatcggtgagaagaaagaaagtgatggggaacagaatggagcattaaagattaca
gatggtcaaattgagaataataatgttgcggctgaaacgtacagaatgccctttctgatg
cttggtctggatttgccagaaccaccacttttcaaagatgtgatggagaaaaatataata
cctcaggtacctttgtttaatatactaaagaagtttgatggtgagatggtaacaactact
gttcgtcctccagcaagaatgagatatcgagtcaccaaattgccacagtattttatactt
catatgcgccgatttactaagaataatttcttcagagaaaagaacccaacattggtgaac
tttccagtgaaaaacctcgagttgaaagactacattcctttgcctgcaccaacaaaggag
aatgaaaagttgcgcaccaagtatgatttaattgctaatgtcgttcatgatggtaagcct
gacgaggggttctacagagtctttgtacagcggaaatcggaagaactatggtatgaaatg
caagatctgcatgtttctgaaacacttcctcagatggttgcattatctgaagcttatatg
cagatatacgaacagcaacagtag
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