Gossypium arboreum (tree cotton): 108486275
Help
Entry
108486275 CDS
T05776
Name
(RefSeq) serine/threonine-protein kinase VPS15 isoform X1
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
108486275
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
gab01001
]
108486275
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108486275
Enzymes [BR:
gab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
108486275
Protein kinases [BR:
gab01001
]
Serine/threonine kinases: Other
VPS15 family
108486275
Membrane trafficking [BR:
gab04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
108486275
Autophagy
Autophagosome formation proteins
PI3K complex
108486275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS15-like_hel
Pkinase
WD40
WD40_WDHD1_1st
WD40_Prp19
WDR55
WD40_CDC20-Fz
HEAT
PK_Tyr_Ser-Thr
NBCH_WD40
Beta-prop_TEP1_C
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR90_beta-prop_4th
HEAT_EZ
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Cohesin_HEAT
TCAD9
APH
UPF0182
Motif
Other DBs
NCBI-GeneID:
108486275
NCBI-ProteinID:
XP_017645728
LinkDB
All DBs
Position
5:complement(922743..931008)
Genome browser
AA seq
1549 aa
AA seq
DB search
MGNKIARTTQVSATEYYLHDLPSSYNLVLKEVLGRGRFFKSILCKHDEGLVLVKVYFKRG
DSIDLREYERRLVHIKEIFRSLEHPHVWPFQFWQETDKAAYLLRQYFFNNLHDRLSTRPF
LSLVEKKWLAFQLLLAAKQCHEKGICHGDIKCENVLVTSWNWVYLADFASFKPTYIPYDD
PSDFSFFFDTGGRRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAIGCVIAELFLEGQP
LFELSQLLAYRRGQYDPSQHLEKIPDIGVRKMILHMIQLEPESRLSAESYLQNYVAAVFP
SYFSPFLHGFYRCWNPLHSDMRIAMCQRVFPEMLKQMMSKRSRDEMGKGLGKSHTLNGHL
SQEIVAKQQSEEIAPKQNLSSANHLLTKREKIDNASIKDQLKLPGNINTLLGDVEQSNHY
LGEKSTRGDTPQYELSQDFKQRGMQSPAVRQNISDLFRKNDHPFLKKITMDDLNSLMSDY
DSQSDTFGMPFLPLPQDSMKCEGMVLVASLLCSCIRNVKLPHLRRGAILLLKTSSLYIDD
EDRLQRVLPYVIAMLSDPAAIVRCAALETLCDILPLVREFPPSDAKIFPEYILPMLSMLP
DDPEESVRICYASNIAKLALTAYGFLIHSIRLSEAGVLNETNLPQKSLASSGESSGRIQR
SNSDAQLGQLRKVIAEVVQELVMGQKQTPNIRRALLQDIGNLCCFFGQRQSNDFLLPILP
AFLNDRDEQLRAVFYGKIVFVCFFVGQRSVEEYLLPYIEQALGDAIEAVIVNALDCLAVL
CKSGFLRKRILIEMIERSFPLLCYPSQWVRRSVVTFLASSSECLGAVDSYVFLAPVIQPF
LRRQPASLDSEKALLSCLKPPVSREVFYEVLQNARSSDMLERQRKIWYNSSAQSKQWEIA
DLLEKGTGELDSMKYWSDKQQSIGSHRPIDSVLQQSGLTEVADDDAKLRALGCNTRNASS
AIDMHDPLCSEKLQFSGLTSPQLNGLNSFMCDKSSEGIPLYSFSMDKRATVAPSAASDTP
LPWMDPISKSFSLASSVPTPKLVSGSFGISAGSKQFYRVVHEPESRENDQIANVNSKFQD
MGLSSTVKGSSVRMEDASTSTDFTGLPSFSRSSSIPDSGWRPRGVLVAHLQEHRSAVNDI
AVSNDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTAMLRNSAQVVVG
ACDGTIHMFSVDHISKGLGNVVEKYSGIADIKKKDVKEGAILTLLNYPVDNCGIQTFMYS
TQNCGIHLWDTRSSSNAWTLKAIPEEGYISCLVAGPCGNWFVSGSSRGVLTLWDLRFRIP
VNSWQYSLVCPVEKMCLFVPPSSVSVSTTARPLIYVAAGCNEVSLWNAENGTCHQVFRAA
NYDSDAEMSDLPWALARPSAKTSSKSDPRRNANPRYRVDELNEPPPRLPGIRSLLPLPSG
DLLTGGTDLRIRRWDHFSPDRSYCICGPNFKGVGNDDFYEARSSFGAQVVQETKRRPLTT
KLTAKAVLAAAATDSAGCHHDSVLSLASVKLNQRLLISSSRDGAIKVWK
NT seq
4650 nt
NT seq
+upstream
nt +downstream
nt
atggggaacaagatcgcgcgaacgacgcaggtctcggcgacggagtattacctgcatgac
ctgccgtcttcgtacaatctggtgttgaaggaggtgctcggtcgaggccgattcttcaag
tcgatcctatgtaagcacgacgaaggtctcgtcctcgttaaggtctacttcaagcgtggc
gattccatcgatctccgtgagtacgagcgtcgactcgttcacatcaaagaaatctttcgc
tcacttgaacacccccacgtttggcccttccagttttggcaagaaacggacaaagcggcc
tatttgttaaggcaatactttttcaataatttacatgatcgattaagtactcggcccttt
ctgagtctagttgaaaagaagtggttggcgtttcagttgcttcttgcagcgaagcagtgc
cacgagaaggggatatgccatggtgatattaagtgtgagaatgtgttggttacctcgtgg
aactgggtttatcttgctgattttgcctcattcaagcccacatatattccttatgacgac
ccttcagatttctccttcttctttgacaccggaggaagaaggctgtgttatcttgcacca
gagagattttatgagcatggaggtgaaatgcaagttgctcaagatgcacctttgaaacca
tctatggacatctttgctattggatgtgtaattgctgagcttttccttgagggccagccg
ctgtttgaactctctcagcttcttgcatatcgcagagggcaatatgatcctagtcaacat
cttgaaaagatcccagatattggagtacgcaagatgatacttcatatgatccaacttgaa
ccagaatctcgcctatctgctgaaagttatctacagaattatgtagctgctgtatttcct
agctacttctcaccatttctgcatggattttatcgttgctggaatcctcttcattctgat
atgaggattgcaatgtgccagagagtgttccctgagatgctgaagcaaatgatgagcaag
aggtcaagggatgagatgggaaaaggtcttggcaagtcacataccttaaatggtcatttg
tcgcaagaaattgttgcaaaacaacagtcagaagagattgctccaaaacaaaatttaagc
tcagcaaatcacttgttgacaaaaagagaaaagatagacaatgcttctattaaggatcag
ttaaagcttcctggaaacattaataccctacttggggatgttgaacagagcaatcattac
cttggggagaagtcaacaagaggggatacacctcaatatgaactttcccaagattttaaa
caacgtggcatgcaatctcctgctgttcgtcaaaatatttctgatttgtttaggaaaaat
gatcacccttttttaaaaaagattaccatggatgatttaaactcattgatgtctgactat
gacagtcaatcagacacgttcggaatgccttttcttccattacctcaagacagtatgaaa
tgtgaagggatggtgctagtcgcctctctgctttgttcttgcatacgtaacgtgaagttg
cctcacttaaggagaggggctatacttttgctgaagacttcttcactatacattgatgat
gaagatcgattgcagcgagtgcttccatatgtaattgcaatgctttcagacccagcggca
attgtgcggtgtgctgcccttgagactttgtgtgacattctgcccttagttcgagaattt
cctccaagcgatgccaaaatttttccggagtatattcttccaatgctttccatgcttcct
gatgatccagaggaaagtgtgagaatttgttatgcaagcaatatagctaagctggctcta
acagcttatggattcttgattcattcaataaggcttagtgaggccggggttcttaatgaa
acgaatttgccacagaagtcattagcatcatctggtgagtcatctgggcgtattcagagg
tcaaacagtgatgcacagttaggccaattgaggaaggtgattgctgaggtagtacaggaa
cttgtaatgggtcaaaagcaaactccaaacattagaagagcactccttcaggacattggc
aacttatgctgtttttttggccagcgacagagcaatgactttttgttgcccatacttcct
gcttttttgaatgatagagatgagcagctaagggcagtgttctatgggaaaattgtgttt
gtctgcttctttgtgggccaacgaagtgtagaggaatatcttttaccttatattgagcag
gctttaggtgatgcaatagaggctgttattgtcaatgcgctggattgtttggccgttctg
tgcaaaagtggttttttgcggaaaagaatattgattgaaatgatagagcgttcttttcca
ttgctatgttatcctagtcaatgggtaaggaggtcagttgtcactttccttgcatctagc
agtgagtgcttgggagctgtagattcttacgtttttcttgctccagttatacagcctttc
ctacgtcgacaacctgcatctctggactctgaaaaggctcttctttcttgtctgaaacca
ccagtctcaagggaagtattttatgaagtcttacaaaatgctagaagttcagatatgttg
gagagacagagaaagatatggtacaattcatcagcacaatctaaacaatgggaaattgcc
gatttactcgagaaagggactggggaattagactcaatgaagtattggtctgacaaacaa
cagtctattggaagtcatagacctattgatagtgtgttgcagcaatcagggctaacagaa
gttgctgatgacgatgccaagctgagagcactggggtgtaatacacgtaatgcttctagt
gcaatcgacatgcatgatccgttatgctcagagaagttacagttttcaggcttaacatct
ccgcagctcaatggtttaaatagtttcatgtgtgataagtcgtcagaaggtatacctttg
tactcttttagcatggacaagcgagctacggtagctccttcagcagcttctgatactcct
ttgccttggatggatccaattagtaaatcattcagcctggctagttcagttccgacgcct
aagcttgtttcaggctcctttggtataagtgctggttctaaacagttctacagagttgtg
catgaaccagaaagtcgggaaaatgatcaaatagccaatgttaatagtaagtttcaagac
atgggattatccagtacagtgaaaggaagttctgttagaatggaagatgcttctacttca
actgattttactggactaccctctttttctcggtcttcatcaattccagattcaggttgg
aggcctcgtggggtgttggttgcacatctgcaggagcaccgatctgctgtcaatgatatt
gcagtttcaaatgatcacagtttctttgtgagtgcatctgatgattccactgtcaaagtg
tgggattcaagaaagttggagaaggatatatcatttaggtcaaggctgacttatcacttg
gaaggaagccgagcactatgcactgcaatgctccgaaattctgcccaagttgttgttgga
gcttgcgatgggacaatacatatgttttctgttgatcatatttctaaaggtctaggaaat
gttgttgaaaagtattcaggtatcgctgatataaaaaagaaggatgtgaaggaaggtgca
atacttacccttttgaactaccccgtagataactgtggcattcagacgtttatgtacagc
acccaaaattgtggtattcatctttgggatacaagatcaagttcaaatgcatggacgctg
aaagcaattccagaggaaggctatatatcgtgtctggtagcgggcccttgcggcaactgg
tttgtttcagggtcttctaggggtgtccttaccctttgggatttgaggttccgtattccg
gtgaactcatggcagtattctcttgtatgcccggtagaaaagatgtgtctctttgtccct
ccttcaagtgtctcagtttctacaactgctaggcctcttatttatgttgctgctggctgc
aatgaagtctcactttggaatgcagagaatgggacctgccaccaggtatttagggctgca
aattatgatagtgatgcagaaatgtctgatttaccatgggcattggctaggccatctgct
aaaacaagctctaaatctgatccgaggaggaatgcaaatccaaggtatcgagtggatgaa
ttaaatgaaccacctcctcgtcttccgggtattcgttcattacttcctttacctagtggt
gatctgttgactgggggcactgacttaagaattcgccgctgggaccatttcagccctgat
agaagttactgtatatgtggcccgaattttaagggagttggaaatgatgatttctatgaa
gcaagatcaagttttggtgcacaagttgtacaggagacaaagagacgacctctaacaaca
aagctgacagcaaaagcagttcttgctgctgctgccactgattctgctggatgccaccat
gattctgtcctctctttggcttcagtgaaattaaaccagagactcttaatctcaagcagt
agagatggggctattaaggtttggaagtga
DBGET
integrated database retrieval system
