Gossypium arboreum (tree cotton): 108486284
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Entry
108486284 CDS
T05776
Name
(RefSeq) vacuolar protein sorting-associated protein 35B-like
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108486284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108486284
Membrane trafficking [BR:
gab04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
108486284
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
FliS
Motif
Other DBs
NCBI-GeneID:
108486284
NCBI-ProteinID:
XP_017645745
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All DBs
Position
8:83934536..83941474
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AA seq
782 aa
AA seq
DB search
MLLIGAEDEEKWLAEGIAGIQHNAFYLHRALDSNNLRDALKYSAQMLSELRTSKLSPQKY
YELYMRAFDELRILEMFFKDESKHGVSVVDLYELVQHAGNILPRLYLLCTVGSVYIKSKE
APAKELLQDLVEMCHGVQHPIRGLFLRSYLAQISRDKLLDIGSDYEGDAETVMDAVEFIL
ENFTEMNKLWVRMQLEGPGRVREKREKERSALQELVGKNLHVLSQIEGVDLEIYKETVLP
RVLEQVVNCKDDLSQYYLMDCIIQVFPDEYHLQTLEMLLAAFPQVQPTVDIKTVLSRLMD
RLSKYAASSADVLTEFLQVEAFTKLSNAIEKVIEMQVDMPAVGAITLYVSLLTFTLRVHP
DRLDYVDQVLGACVKKLSSIPKLEDRWATKQLVALLSAPLEKYNDTVTALTLSNYPRVMD
HLDNGTNKVMAMVIIESIMKNNTCISTADKVEVLFELIKGLIKDLDGATDELDEEDFKDE
QNSVAKLIHMLYNNEPEEMLKIICIVWKHTMAGGPKRLPFTVPSLVFSALRLVRQMQGQE
GDIVGEEVPATPKKIFQLMIEALSAVPSPELALRLYLQCAKAANGCDLEYVAYEFFTQVF
VLYEEEIANSKAQVTAIHLIIGALQRMNVFNVENRDTLTHKTTGYSARLLKKPDQCRAVY
ACSHLFWVDGQDGIRDGERVLLCLKRALRIANAAQQMASIARDSSGPLTLFVEILNKYLY
YFEKGNKQITAAAIQHLIELINTEMQSDSATSDAFLASTLRYIQFQKQRGGVMGAKFESI
KL
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgttgttaatcggagcagaggacgaagagaaatggctggcggaagggatcgctggtatt
cagcacaacgctttttacttgcatcgagctttggattccaataatcttagagatgctctc
aagtactcggctcagatgttatcagagctccggacctccaaactctctcctcaaaaatat
tacgaactttatatgcgagcttttgatgaattgaggatattggagatgttcttcaaagat
gaaagcaaacacggtgtctctgtggttgatctgtatgagctagttcaacatgctggcaat
attttgcctagattgtatctcctatgcacggtaggatctgtctatatcaaatctaaggag
gctcctgccaaggaacttcttcaagatcttgtggaaatgtgtcatggagttcaacatccc
atacgtggactttttttaaggagttaccttgctcaaatcagtcgagacaagttactagat
attggttctgattatgagggagatgctgaaactgtgatggatgctgtggaatttatactg
gaaaatttcaccgagatgaataaactttgggtgcgaatgcagctcgagggacctggtaga
gttagagagaagcgggaaaaagaaaggagcgcacttcaagaacttgtaggaaaaaatctc
catgttctcagtcagatagaaggggtggaccttgagatttacaaagaaacagttcttcca
agagtcttagagcaggttgtaaattgcaaagatgatctttcccaatattatttgatggat
tgcataattcaggtgttccctgatgagtatcacttgcagactcttgagatgttattggca
gctttcccccaggtccagccaacagttgacatcaagacagttttgtctcgactaatggac
agactgtcaaagtatgctgcttcaagtgctgatgtattaactgaatttctacaagttgaa
gccttcactaaattgagcaatgcaattgagaaggtcatagaaatgcaggtagacatgcct
gctgttggagctataactttgtacgtctctcttcttacctttactcttcgtgttcatcct
gatcggcttgattatgtggatcaagtactgggagcctgtgttaagaagctgtcgagcata
ccaaaacttgaagatagatgggcaacaaaacaattggttgctcttttgagtgctccattg
gagaaatacaatgatacagtaacagccttgacactttctaattatccacgagtaatggac
catcttgataatggaacaaataaagtcatggcaatggttatcattgaaagcattatgaag
aataatacatgcatatcaactgcggacaaggttgaggtgttgtttgaattaataaaggga
ctcattaaggacctggatggtgctacggatgagcttgatgaagaggatttcaaagatgag
caaaattctgttgctaagctaattcacatgctatataataatgaaccggaggaaatgttg
aagattatatgtattgtttggaagcataccatggctgggggaccaaaacgcctacccttt
acagttccttcacttgttttttctgcacttcggttggttaggcaaatgcaaggtcaggag
ggagacatagtgggagaagaagtgccagcaacaccaaagaaaatttttcagcttatgatt
gaagcactttcagctgttccatcacctgaacttgctttaaggttgtacctacaatgtgct
aaggcagctaatggctgtgatcttgagtatgttgcttatgaatttttcactcaagtgttt
gtattgtacgaagaagaaattgcgaactccaaagcccaagtgactgcaattcatctgata
attggggctctacagaggatgaatgtatttaatgtcgagaaccgagatactttgacacac
aagaccacaggatattcagctcgactattgaagaagcccgatcagtgcagagccgtttac
gcatgttcacatcttttttgggttgatggtcaggacggcattagggatggggagagggtc
ctgctgtgcctaaagcgagcattgaggatcgcaaatgctgctcaacagatggctagtatt
gcacgagatagcagtgggccactcacgctctttgttgagatattgaacaagtacctctat
tactttgaaaaaggaaataaacaaatcaccgctgctgcgatccaacacctgatagaatta
atcaatacagagatgcagagtgattctgcaacctcagatgctttccttgccagtaccttg
cgttacattcaattccagaaacaaagaggaggtgtaatgggtgccaaatttgaatccatt
aaattgtaa
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