Gossypium arboreum (tree cotton): 108486299
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Entry
108486299 CDS
T05776
Name
(RefSeq) LOW QUALITY PROTEIN: coronatine-insensitive protein 1
KO
K13463
coronatine-insensitive protein 1
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108486299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108486299
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
108486299
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
Motif
Other DBs
NCBI-GeneID:
108486299
NCBI-ProteinID:
XP_017645759
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Position
6:complement(8501921..8504181)
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AA seq
311 aa
AA seq
DB search
MGETGLSNVVLDLVMMCVDNPKDRDAISLVXRRWYELDAVTRKHISISLCSTTSPDRLLR
PFRHLESLKLKGKPRAAMFNLIPLDWGGHVTPWVKEIVEXFNCLKSVHFRRMIVEDLDLE
XLAKSRGRALQALKLDKCSGFSTDGLLHVGRLCRQLRTLFLEESSIIEKNGQWLHEIAIN
ISFLDTLNFYMINLVRVSFEDLELIVRNCLYLASVKVRDAEILDLVGFFRAASVLEEFCG
SSVNEPEMYAAVSFPPRVCCLGLNYIRNNELPVVFPFASLLKKLDLIYALLNTEDHCLLI
QRCPQLRSSEI
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaaccggtttatccaatgtcgttttggacttggtgatgatgtgcgtcgacaac
ccgaaagaccgcgatgccatttccctcgttntccggcgctggtacgagctcgacgcagtg
acacgtaagcacatatcgatttcgctttgttccacgacgagtcccgatcggttgctacgg
ccgttccggcacttggaatcgttgaaattgaaaggaaagcctcgggcggcaatgtttaat
ttgatacccttagattggggagggcacgtgacgccttgggtgaaggaaatagtggagnat
ttcaattgcttgaaatccgtgcatttcagaaggatgattgttgaagatttagatttggaa
ngtttggccaagtctagagggagggctttgcaggctttgaagcttgataaatgctctggt
ttctctactgatggtctcttgcacgttggtcgcttgtgccggcaattaagaaccttgttc
ctggaagagagctcgattattgagaaaaatggccaatggcttcatgagattgcaataaat
atttcatttctcgatactttaaacttttacatgatcaatcttgtcagagtgagttttgaa
gaccttgaacttattgtccgaaattgtctatacttggcctctgtgaaggttagagatgct
gaaattttagaccttgtaggtttctttcgtgctgcttccgttttagaagaattttgtggg
agttctgtcaacgagcctgaaatgtatgctgctgtatcattccccccaagagtgtgctgt
ttgggtctaaactatatcaggaacaatgaactgccagtagtgtttccttttgcatcattg
cttaaaaagttagatctcatctatgcattactcaacacggaagaccactgcttgttaatt
caaagatgtccccaacttagaagctctgaaatataa
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