KEGG   Gossypium arboreum (tree cotton): 108486345
Entry
108486345         CDS       T05776                                 
Name
(RefSeq) protein RRC1-like isoform X2
  KO
K12842  U2-associated protein SR140
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108486345
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gab03041]
    108486345
Spliceosome [BR:gab03041]
 Complex A
  U2 snRNP components
   U2 related factors
    108486345
 Complex B
    108486345
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID RRM_7 CTK3
Other DBs
NCBI-GeneID: 108486345
NCBI-ProteinID: XP_017645845
UniProt: A0A0B0MSR2
LinkDB
Position
6:87597780..87605144
AA seq 974 aa
MSPFSITRKKTPFQKHREEEEAKKKRAEDETARLYEEFVASFQGDNTPGSKAFVRGGTIN
PNERLKSDSEGEKSKDGMSVPKKGSRYVPSFIPPPLAAKEKESEKKEEERMKEKEKGKSR
NIDHFMEELKHEQEMRERRNLEREQWRDGRHSDSSAPSSRFDELPDDFDPSGKLPGSLDD
ADPQTTNLYVGNLSPKVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNR
AEGQAAKDEMQGVIVYEYELKIGWGKSVALPSQALPAPPPGQMAIRSKEGSSIILSGPSG
PPVTSLPNQNSELVLTPNIPDIMVTAPEDGQLRHVIDTMALYVLDGGCDFEQAIMERGRG
NPLFNFLFELGSKEHTYYVWRLYSFAQGDTLQRWRTEPFIMVTGSGRWVPPPLPVSKSPE
HEKDSSATYAAGRSRRVDPERPLTDPQRDEFEDMLRALTLERSQIKEAMGFALDNADAAG
EVVEVLTESLTLKETPIPTKVARLMLVSDILHNSSAPVKNASAYRTKFEATLPDIMESFN
DLYRSVTGRITAEALKERVLKVLQVWSDWFLFSDAYVNGLRATFLRSGNSGVAPFHSICG
DAPEIEKKTSSEDAVDGIKANQDTALAMGKSAAMKELMDLPLAELERRCRHNGLSLVGGR
EIMVARLLSLEDAEKQRGYELDDELKLRSSYSRYSSGQRGANVETEVAGLSGRTRYAEDE
IPSQRKGSVPLAETLPIPNPELKAFTKKEKTDPVLPASKWAREDNDSDDEEKRSSKGLGL
SYSSSGSENAGDGHGKADELEFGTEVNIPVPSESAMNEEQRQKLRRLEVALIEYRESLEE
QGIKNAEDIEKRVAIHRKRLESEYGLSDSGEGRKRTSRERRDRRDDVHDSSRKRHRSQSQ
SESPPRKQSNRGRDRENDSEKDRESHRERERYHDLQNERGRERERDRWEKSGSRERDDHD
RDRGRDRDSRRRMK
NT seq 2925 nt   +upstreamnt  +downstreamnt
atgagtccattttcaatcacgcgtaagaaaacgcctttccagaagcacagagaagaggaa
gaagccaagaagaagagggcagaggacgaaactgctcgattatacgaggagtttgtggca
tcgtttcaaggagataatacccctggatcgaaggcatttgttcgaggtggaacaatcaat
cccaacgagaggttgaaatccgattctgaaggtgaaaagtccaaagatgggatgtctgtt
ccaaagaagggaagtaggtatgttccatctttcataccacctcctttggcagccaaggaa
aaggaatctgagaagaaggaggaggagaggatgaaggagaaagagaagggaaagtctcga
aatattgaccattttatggaggagctgaagcatgaacaagagatgagggaaaggagaaat
ctggaacgtgaacaatggcgtgatgggcgtcatagtgatagttcagctccatctagtcgc
tttgatgaactgcctgatgattttgatcctagtggaaaattgcccggatcacttgatgat
gctgatcctcaaacgacaaatctctatgttggaaatctctcaccaaaagttgatgaaaat
tttcttctgcggacttttggaagatttggacctattgctagtgtgaaaattatgtggcct
aggacagaggaggagcgaagaaggcaaagaaattgtggttttgtggctttcatgaataga
gctgagggacaagctgcaaaagatgaaatgcaaggagttattgtatatgaatatgaattg
aaaattgggtggggtaaatctgttgctcttccatcacaagcattacctgctcccccacct
ggacagatggctatcaggagtaaggagggtagttctataatcttatctggtccttcaggt
ccaccagtcacatctcttccaaatcagaattctgaactggttcttactccaaatattcca
gatataatggtcactgcacctgaggatggccagctccgccatgtgatagatacaatggct
ctttatgtccttgatggaggatgtgactttgaacaagctattatggagaggggtcgtggc
aatcctctattcaactttttatttgagcttggctcaaaggagcacacttactacgtctgg
aggctatattcttttgcccagggtgatactcttcaaaggtggcggacggagccttttatc
atggtaactgggagtggaagatgggtaccaccacctttgccagtgtcaaaaagtccagag
catgaaaaggactcttctgccacatatgccgcaggaagaagcaggcgggtggacccagaa
aggccacttactgatccacaaagggatgaatttgaggacatgctacgggcattgacattg
gagaggagtcaaataaaggaagccatgggctttgctttggataatgctgatgctgctgga
gaggtagttgaagttttgacagagtctctgacacttaaagaaacacctattccaactaaa
gtagcaaggcttatgcttgtctctgacattcttcataatagcagtgctcctgttaaaaat
gcatctgcataccgtactaaatttgaagcaacattacctgatataatggagagctttaat
gatctgtaccgcagtgtaacaggaaggatcactgctgaagccctaaaggaaagggttctg
aaagtgttgcaagtatggtcagattggtttcttttctcagatgcatacgtgaatggacta
cgagccacttttcttcgatcaggaaactctggagtggccccattccattctatttgtggt
gatgcaccagaaattgaaaagaagactagctcagaagatgcagttgatgggattaaagct
aatcaagatactgcgttggccatgggcaaaagtgcagctatgaaggagttaatggatctc
ccacttgccgagttggaaaggcgctgtaggcataatggattatctcttgttggtggtaga
gaaataatggttgcacgactattaagtctggaagatgccgaaaagcagaggggttatgaa
ctagatgatgagttgaagctgcgctcaagttatagtcggtattctagtggtcagagaggt
gcaaatgttgaaacagaagtggcgggattgtctggacggactcgttatgcagaggatgag
atcccttcacaacgcaaagggtctgtacctctggctgaaacccttccaatcccaaatcct
gaactaaaagcattcacaaagaaagagaaaactgatcctgttttgccagcctctaaatgg
gctagagaggataatgacagtgatgatgaagaaaagagaagctccaagggtctggggttg
agctattcatcttctggaagtgagaatgctggtgatggtcatggtaaggctgacgaattg
gagtttggaactgaggtgaacattccagttccatctgaaagtgcaatgaatgaagagcag
aggcaaaagttgagaagacttgaggttgctcttatagaatacagagaatcccttgaggag
caaggaattaaaaatgccgaggatattgaaaaaagggttgcaattcatcggaaacggtta
gaatctgaatatggtttatcagattctggtgaaggaagaaaaagaacatcgagagaaagg
agagataggcgggatgatgtgcacgactcttcaagaaagcggcatcgaagtcaaagccaa
agtgagagccctccacggaaacaatccaacagaggcagggatagagaaaatgattcagaa
aaggaccgcgaaagtcacagagaaagagagagatatcatgacctgcaaaatgaaaggggg
agagagagggagcgagaccgctgggaaaagagtggaagcagagaaagagatgaccatgac
agagatagaggtagggatagggatagccgaaggcgaatgaaatga

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