Gossypium arboreum (tree cotton): 108486348
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Entry
108486348 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108486348
KO
K13137
serine-threonine kinase receptor-associated protein
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gab03041
]
108486348
Spliceosome [BR:
gab03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
108486348
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EIF3I
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_SCAP
NBCH_WD40
Beta-prop_EML
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_NWD2_C
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_WDR19_1st
RMC1_N
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
108486348
NCBI-ProteinID:
XP_017645849
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All DBs
Position
6:complement(132080759..132084780)
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AA seq
346 aa
AA seq
DB search
MDKKKIAVPLVCHGHSRPVVDLFYSPVTLDGFFLISASKDSSPMLRNGETGDWIGTFEGH
KGAVWSVCLDTNALRAASGSADFTAKVWNALTGDILHSFEHKHIVRACAFSEDTRLLLTG
GIEKVLRIYDLNRPEAPPREVDKSPGSVRMVSWMHSDQTLLSSCTDMGGVRLWDVRSGKI
VQTLETKSPVTSAEVSQDGRYMTTADGSTVKFWDADHFGLVKSYNMPCTVESASLEPKYG
NKFIAGGEDMWVRVFDFHTGDETACNKGHHGPVHCVRFSPGGKSYASGSEDGTIRIWQTG
PLTDHEETKSHAANGSVGKVKVSVEDVSQKIGGFHIAEEGKTKEKE
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggacaagaaaaagattgcggtcccacttgtatgtcatggccattcacgtcctgttgtg
gatctcttttatagtcctgtcactctagatggcttttttctcattagtgccagcaaagat
tccagtcccatgctgaggaatggtgaaactggagattggataggaacgtttgaaggacac
aagggtgcagtgtggagtgtttgcttggatacaaacgctttacgggctgcttctggttct
gccgactttactgcgaaagtgtggaatgcactaacaggtgacatattgcactcatttgag
cataagcatatagttcgagcttgtgctttttctgaggatacacgccttctgttgactgga
ggaatagagaaagtcctccgtatttatgatttgaatcgtccagaagcacctccgagagaa
gtagacaaatctccgggatctgtcagaatggtttcatggatgcatagtgatcagacgtta
ttaagttcttgcactgatatggggggtgtcagattatgggatgtaaggagtggtaaaata
gttcaaacactagagaccaagtcacctgtgaccagtgctgaagtgagtcaagatggccga
tatatgacaactgcagatggatctacagttaagttctgggatgcagaccactttgggttg
gtaaagagctacaacatgccttgcacggttgaatcggcttcattggaaccaaaatatgga
aataaattcattgccggaggagaagatatgtgggttcgtgtttttgatttccacaccgga
gatgagacagcatgcaacaagggtcatcatggtcctgtacattgtgtacgtttctcacca
ggagggaaatcatatgcctcaggatccgaggatggaaccatcagaatatggcagacaggc
cctttgactgatcatgaagaaaccaaatcacatgcagcaaacggatcagttggaaaggtg
aaggtatcagtggaagatgtttcgcagaagattgggggcttccatattgcagaagagggc
aagaccaaggagaaagagtaa
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