Gossypium arboreum (tree cotton): 108486377
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Entry
108486377 CDS
T05776
Name
(RefSeq) protein REDUCED CHLOROPLAST COVERAGE 3-like isoform X1
KO
K03255
protein TIF31
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
gab03012
]
108486377
Translation factors [BR:
gab03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
108486377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
eIF3_p135
TPR_10
TPR_NPHP3
CLU_N
TPR_2
TPR_9
TPR_1
CLU
TPR_8
TPR_MalT
ANAPC3
Motif
Other DBs
NCBI-GeneID:
108486377
NCBI-ProteinID:
XP_017645899
UniProt:
A0ABR0PQQ6
LinkDB
All DBs
Position
6:2696917..2706669
Genome browser
AA seq
1648 aa
AA seq
DB search
MAPKSSSKSKSNKAKPEKKNKKKEEKVVPTVLDITVITPYESQVILKGISTDKIVDVKRL
LASHVETCHFTNYSLTHEVKGKRLNEKVEVATLKPCLLKMVEEDYTNEDQAVAHVRRLLD
IVACTTRFSKPKRVRSQSSSLSSVSSDSKSKMVNGGLHHRPREPSDGGPGTAWIMESMEM
AAIQPTPKLSEFYDFFSFSHLSPPILNLRKCEPKDVEGRHEGDYFIMQIKICNGKQIQVV
ASVKGFYTVGKHFFMSHSLLDLLQNLSQAFADAYESLMKAFIEHNKFGNLPYGFRANTWL
VPPLVANSPSTFLSFPLEDEQWGGNGGGQGRNGEYDLQPWATDFAILANLPCKTEEERVV
RDRKAFLLHSRFVDVSIFKAVATIQHVTNNRSIVKGTVNSHPDAVLHEDRIGDLSITVKQ
ESADVKVAGHHSFGMTANEVAQRNLLKGISADESAVFHDISSMGTVIVRHCGYIAIVKVV
GEVKNELHSARDIDIDDQPDGGANALNINSLRVLLHKSGAKESSGGQSHQLNSNDSEPSR
CLVRQVVKESLTKLEENSIVPERSIRLELGSCWLQYLQKQETSTDTTSNGLGCDHEAEPA
VKGLGKHFKCLKKRDKKPSSSGSKVDKEENDGEPCSMNQSIGVSRNQMELKNLISEEAFS
RLEESRTGLHLKSVNELIKMAYKYYDDVALPKLVTDFGSLELSPTDGRSLTDFMHLRGLK
MQSLGRVVELAEKLPHIQSLCIHEMVTRAFKHVLKAVVASVDKFEDLPAAIASSLNFLLG
NNGSEDNAENANDDYLLKLRWLKRFLSAKFGWKLRDEFRHLRKLSILRELCHKVGLELVP
KDYDMECKEPFKGCNIISIYPVCKHIVCASADGRTLLESSKAALDKGKLEDAVNYGTKAL
AKMIAVCGPYHRTTASAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTAKSY
GDLAVYYYQLQHFEMALKYVNRSLFLLHFTCGLSHPNTAATYINVAMMEEGMGNVHVALR
YLHEALKCNQRLLGADHIQTAASYHAIAIALSLMEAYSLSVQHEQTTFKILQAKLGQDDL
RTQDSAAWIEYFESKALEQQEAARNGTPKPDASIASKGHLSVSDLLDYISPDQVSKGTDV
QKKPLRAKVLQTSDKTHDACHNFVTDSSVFNAVSEKSISTADINERGMVSSICLEEPKKT
NDVTRVEPMVTSEVFEETTSDEGWQEANSKGRSGNAVGRKSRRKRTALANVRVSGSRRET
ILPVRKNSSKNIVKEVVPVKQLMSHNSNPGGNSVSLQGSVSKGSLSSANLSAIASKCLSY
KEVAVAPPGTVLKPLHEGETEHQACTIRTETTKSEDGDHMSVIDNVVDNDDDETEGTHDS
ENQSEESAPELDNVSSEPATKEDGSNISVANNIADDSENRSEEAAPELDKVSSEPANMED
RNSISVVHNVAHDDNREETVPEHDKVSYVNTEKSVETKGSKLSALAEPFNPGALYIAVTS
VYDVTACQAMLAEPVIEPAVAARVRCGPMFPLYHGNNHSYNMKQGFPRYQTLEQTEFRPP
RVMNPHALEFVPTTEPATEAKALHGNEGHDVASQSSTCEQPKTSDVNIKKTRDGEGFTVV
TKRRRKRQQFMNGVSNGPYNHHHQSICA
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atggccccaaaatcaagcagcaaaagcaaatcaaacaaagctaaaccagagaagaagaac
aagaaaaaagaggagaaagttgttcctactgttcttgatatcactgtcattactccatat
gaatcccaagttatactcaagggtatttcaactgataagatagttgatgtaaaaaggcta
ttggcttctcatgttgaaacatgccattttacaaactattctttaactcatgaggtcaaa
gggaagagattgaatgagaaagtagaagtggcaactttgaagccatgtttgctcaaaatg
gttgaagaggattataccaatgaagatcaggcggtagctcacgtgcggagactcctagat
attgtagcgtgcaccaccaggttctccaagcctaaacgagtacgatcacaatcatcatcg
ttgtcatcagtatcgtccgattcaaaatctaaaatggttaacggcgggctccaccatcgt
cctcgagagccgtccgatggaggtcctggaacggcgtggattatggagagcatggagatg
gctgccattcagcctaccccaaaattatcggaattttatgatttcttttccttctctcac
ctctctccgcccattctcaatttgaggaaatgtgagcccaaggatgttgaagggaggcat
gaaggtgactatttcataatgcagataaaaatctgcaatgggaagcaaatacaggtagtt
gcatcagtaaaagggttttatactgtgggaaagcattttttcatgagccactctttgtta
gatcttttgcaaaatctaagccaagcctttgctgatgcatatgaatcccttatgaaagct
ttcatagaacacaataagttcggcaatcttccatatggatttcgtgcaaatacatggctt
gttcctccccttgttgccaactctccatcaaccttcctttcttttccgttggaagatgag
caatggggtggtaatggtggaggccagggaagaaatggtgaatatgatcttcaaccgtgg
gctacggattttgcaatattggctaaccttccttgcaaaaccgaagaggagagggtagtt
cgtgatcgcaaggcctttttgcttcatagtcgatttgttgatgtctcgatctttaaagct
gttgcaacaatacaacatgttacgaataacaggtcaattgtgaaaggcactgtaaatagc
catcctgacgcagttcttcatgaggaccgtataggtgacttgtccattacggtaaaacaa
gaatcagcggatgtaaaggttgctggtcatcattcatttggcatgactgctaatgaagtt
gctcaaaggaatttacttaaagggatatctgcagacgagagtgcggtttttcatgatatt
tcctcgatgggcactgtcattgttagacattgtggctacattgcaatcgtaaaggttgtt
ggtgaagtgaagaacgaactgcacagtgctcgggatattgacattgatgatcaaccagac
ggaggagctaatgctcttaacatcaacagcttaagggttttacttcacaagtcaggcgct
aaagaatcgagtggaggccaatcacatcaactcaactcaaatgattccgaaccttctaga
tgccttgttcggcaagtagttaaagagagcttgaccaaactagaggagaactcgattgtt
cctgaaaggtctattagattagaactcggttcttgttggttgcaatatctacaaaaacag
gaaacttcgactgatactacttcaaacggacttggttgtgatcatgaggctgaaccggct
gtgaaaggtcttggaaagcattttaaatgcttaaagaaaagggataaaaaaccaagtagc
agcggtagcaaagttgacaaggaagaaaatgatggtgagccatgcagtatgaatcaaagc
attggtgtgtccagaaatcagatggaactgaagaaccttatttccgaagaagctttctca
cggcttgaagaaagtcgaaccggtcttcacttaaagtcagtcaatgagcttattaagatg
gcgtacaagtactatgatgacgttgccttaccaaagctggtaacagactttggatcactc
gaactttcacccaccgatggtcgttccctgactgactttatgcatctaaggggactaaaa
atgcagtctttgggtcgtgtggttgaacttgctgagaagctgcctcacatacaatcactt
tgcatacatgagatggttactcgagctttcaaacacgtactcaaagcagtcgttgcatct
gttgacaaattcgaggacttacctgcagctatagcttcatccctaaatttcttactcgga
aataatggatcagaagataatgctgaaaatgcaaatgatgactatttgctaaaattgagg
tggttaaaaaggtttctttctgcaaaatttggttggaaactacgagatgaattccggcat
ttgagaaaactatccattcttcgagaactttgccataaggttggtctagagttggttcct
aaagactatgacatggaatgcaaagaacctttcaaaggttgcaatattattagcatttat
cctgtttgtaagcatatagtatgcgcttctgccgatggcagaacattgttagagtcatcc
aaggcggctcttgacaaaggaaaactagaggatgcggttaattatgggacaaaggcatta
gcaaagatgatagctgtatgtggtccttaccatcgaactactgcgagtgcttacagtctt
cttgctgtggttctctaccatactggtgatttcaatcaggcaactatatatcaacagaaa
gctttggatattaatgagagggagctcggtcttgatcatccagacacggcgaaaagctat
ggggatcttgctgtatattattatcagcttcaacactttgaaatggctttgaaatatgta
aaccgttctttattccttctccattttacttgcggattatctcacccaaataccgccgca
acatatataaatgtggctatgatggaagaaggcatgggaaatgttcatgtggctctcagg
tatttgcatgaagctctgaagtgcaaccagagactactaggagcggatcacatacagacg
gctgcaagctatcatgccattgccattgctctttcattgatggaggcatattctttaagc
gtgcaacatgaacaaactacattcaaaatacttcaagcaaaactcggacaagatgacctt
cgtacacaggactccgctgcttggatcgaatactttgaatcaaaagctttagaacagcaa
gaagctgcacgaaatggaactccgaagccagatgcttcaattgcaagcaagggtcatctt
agtgtgtccgacctgctcgattacattagtcccgatcaagtttctaaaggaactgatgta
cagaagaagccgctgcgtgccaaggtgttacagactagtgacaaaacccatgacgcatgt
cacaactttgtaacagatagttctgtgttcaatgctgtctcggagaaaagtatcagtact
gcagatattaatgaaagaggaatggtgagttctatttgtcttgaagagccaaagaaaact
aatgatgtcactagagttgagccaatggttacaagtgaagttttcgaagagacaacttcg
gatgaagggtggcaagaagccaattcgaaaggacggtcgggaaatgccgtcggaaggaag
tctcgaaggaagagaactgcccttgcaaatgttagagtgagtggctctaggcgagaaact
attttgccagtgagaaaaaattcctctaagaacatcgtaaaggaggtagttccggtgaag
caattgatgtcccataactcaaaccccggagggaattctgttagtttacaaggttctgtt
tccaaaggttccttgtcttcagcaaatctcagtgccattgcttcgaaatgtctttcttac
aaagaagtagctgtagcacctccaggtacagttctgaagccattacatgagggggaaact
gaacatcaggcgtgcaccatccgaactgagactacaaaatcggaggatggagaccatatg
tctgttattgataacgttgtagataatgatgatgatgaaactgaaggaactcatgatagc
gaaaatcaatcagaagaatctgctcctgaacttgataacgtttcttccgagcctgcaacc
aaggaggatggaagcaatatctctgttgctaataacattgcagatgacagtgaaaatcga
tcagaagaagctgctcctgaactcgataaggtttcttctgagcctgcaaacatggaggac
agaaacagtatctctgttgttcataatgttgcacatgatgacaatcgtgaagaaacggtt
cctgaacatgataaggtttcgtatgtaaatactgaaaagtctgtagaaacaaagggtagt
aagctatcagcattagcggaaccgttcaatcccggagcactctacattgctgttacaagt
gtttatgatgtaacagcctgtcaagctatgcttgctgagcctgttattgaacctgcagtt
gcagctcgagttcgttgcggaccgatgttcccattatatcacggaaacaaccattcttac
aacatgaaacaaggctttccgagataccaaactctcgaacaaactgagttccgacctccg
cgagttatgaaccctcatgcactcgagtttgtacctacaactgagccagcaacagaagca
aaagctctccatgggaatgaaggacatgacgtggcatctcaatccagcacctgtgaacaa
ccaaaaacatcagatgtaaatataaagaaaacccgggacggtgaaggatttacggttgtg
acgaagcgaagaaggaagaggcagcagtttatgaatggagtaagtaatggaccatacaat
catcatcatcaatcaatatgtgcttag
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integrated database retrieval system
