Gossypium arboreum (tree cotton): 108486387
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Entry
108486387 CDS
T05776
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03015
mRNA surveillance pathway
gab04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108486387
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
108486387
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gab01009
]
108486387
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108486387
03036 Chromosome and associated proteins [BR:
gab03036
]
108486387
Protein phosphatases and associated proteins [BR:
gab01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
108486387
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
108486387
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
108486387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
108486387
NCBI-ProteinID:
XP_052885719
LinkDB
All DBs
Position
6:109783582..109790389
Genome browser
AA seq
510 aa
AA seq
DB search
MNNGGAEAAVAPVGGPQPLEWKFSQVFGERTAGEEIQDVDIISAIEFNRTGDHLATGDRG
GRVVLFERTDTLDHVGQRRDLEKMDYPINRHPLFRYKTEFQSHEPEFDYLKSLEIEEKIN
KIRWCQSAYGALSLLSTNDKTIKFWKVQEKQVKKVCDLNVDSTKAMGNGPIVGSSISTSS
KQYMANGGCTSNDFSLPNGGLPSLRLPMVTTLETKLMARCRRIYSHAHDYHINSISNNSD
GETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPIHCNMLAYSSSK
GSIRLVDMRQSALCDIHIKLFEEQEAPGSRSFFTDIIASISDIKFAKDGRHILSRDYLTL
KLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATGSYSNLFRV
FGCSEGSKEATTLEANKNPMRRQGLTASRPSRSLGSPSGVVRRGKGADNSAVDANGNTFD
FTTKLLHLAWHPTENSIACAASNSLYMYYA
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacggcggcgctgaagcagccgtggctccggtgggagggccacaaccactggag
tggaaattctcgcaggtgttcggagagcgaactgccggagaggaaatacaggatgttgat
atcatctccgctattgaatttaatagaactggagatcaccttgctactggagatcgagga
ggtcgggtggttttgtttgaaaggacagacactctagatcatgttgggcaacggagagat
ctagagaagatggattatccaattaataggcaccctttatttcgctataaaacagagttt
cagagccatgaacctgagtttgactacctcaagagcttggaaattgaggagaaaattaac
aaaattaggtggtgccagtcggcttatggtgctctttctcttttgtcgacaaatgacaaa
acaatcaagttctggaaggtacaagagaagcaggtcaaaaaagtatgtgacttgaatgtg
gattccaccaaagccatgggaaatggtcctattgttggttcaagtatatcaacaagctcc
aaacaatacatggcaaatggaggatgtacaagcaatgacttttcattgccaaatgggggt
ttgccatctttgcgtttgcctatggtaactactcttgagacaaaacttatggccagatgt
cgaagaatatattctcatgcgcatgactatcatattaattccatatccaataacagtgat
ggtgaaacttttatttcggctgacgacctgcgaattaatctctggaacctggaaattagc
aaccaaagttttaacattgttgatgtgaaacctgcaaacatggaggatttgactgaggtg
ataacttcggcagaatttcatcctatacactgtaatatgttagcttacagtagttcaaag
ggttcaattcgtcttgttgatatgcgacagtctgcgttgtgtgatatccacattaaattg
tttgaggaacaagaagctccaggctccaggtcttttttcacagatatcatagcatcaatc
tcagacatcaagtttgccaaggatggaagacacatactaagtcgtgactacttgaccctt
aagctgtgggacataaatatggattctggtccagttgcaaccttccaagttcatgaatac
cttaggcctaagctttgtgatttgtatgaaaatgattccatctttgataaatttgagtgt
tgtctaagtggagatggacttcgagtggctactggttcctacagcaatctgtttcgggtg
tttggttgttctgaaggtagcaaggaagcaacaacactggaagccaacaaaaaccccatg
agaagacaaggtctgacagcatcaagaccttcaagatctcttggtagtccttctggtgtt
gttagacgagggaaaggagcagataactcagcagttgatgcaaatggaaatacttttgat
ttcacaacaaagttgctacacctagcatggcatccaactgaaaactccatcgcttgtgcc
gcatcaaacagtctatacatgtactatgcgtga
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