Gossypium arboreum (tree cotton): 108486484
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Entry
108486484 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108486484
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108486484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gab03021
]
108486484
03019 Messenger RNA biogenesis [BR:
gab03019
]
108486484
Transcription machinery [BR:
gab03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
108486484
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
108486484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
108486484
NCBI-ProteinID:
XP_052886058
LinkDB
All DBs
Position
6:6118074..6124221
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AA seq
315 aa
AA seq
DB search
MRPPFNSFPHRPQQNGFQSNSAVANQCNNNMNMLMMQPQMGIFNPQLPTPLSNNINNINK
NSSVMPLLNNVGFMNGANQQFPTQNNSTGFPQIGPIFPNMNNLAMFQQLPAQFNNSLHNP
NQPNWLNLPQQNNMGLTNGQQQRQQLQQQQLFLQNQLQNVSQLLNAQLPDLSQFVSGGQA
IVPNPHFGFMQPNQMQQQANQSQQNLADVNASNLSSAPASQVPGDPSFRRPKGGPGKNSQ
NMNNFPGRNAKRIQNGVDLRSLSSISLGSIKRIMQRERLHLLMDIRKKGLIMRGQLNFLI
LILQTQLKKREDRLL
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgagacctcctttcaattcgtttccccaccgaccccagcagaatggttttcaatcaaat
tctgcggtggcaaaccagtgcaataacaacatgaacatgcttatgatgcaacctcaaatg
ggtatttttaatcctcagctgccaactccgttgagtaataatattaataatattaataag
aattctagtgttatgccattgctaaataatgttggattcatgaatggagctaaccagcag
tttcctacacaaaataacagtacggggtttcctcaaattggtccaattttcccaaacatg
aacaatcttgcaatgttccaacaacttcctgctcaattcaataactctttgcataatcca
aatcagccaaattggttgaatttgcctcaacaaaataatatgggtttaacaaatgggcag
cagcagcggcaacaactacagcaacaacagctttttttacagaaccaattgcagaatgtg
agccaacttttgaatgctcaactcccagatctctcacagtttgtttctggtggccaagcc
attgtgccgaatccgcatttcgggtttatgcagccaaaccagatgcagcagcaagccaat
cagagtcagcaaaatttagcggatgttaatgcatcgaatttgtcttctgcacctgcttca
caagtaccaggagacccttctttcagaaggccaaagggtggtcctggtaaaaacagtcag
aatatgaacaactttccaggaagaaatgctaaaaggattcaaaatggggttgatctcaga
agtctaagttcgatcagcctcggttccatcaagcggataatgcaaagagagcgtttgcat
cttctaatggacataagaaaaaagggcctgataatgagagggcagctaaatttcctcatt
ctaattctgcaaacccagctaaagaaaagagaagatcgcttgctttga
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