Gossypium arboreum (tree cotton): 108486487
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Entry
108486487 CDS
T05776
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gab01002
]
108486487
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108486487
Enzymes [BR:
gab01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108486487
Peptidases and inhibitors [BR:
gab01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108486487
Ubiquitin system [BR:
gab04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108486487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
108486487
NCBI-ProteinID:
XP_017646053
UniProt:
A0A0B0NKH2
LinkDB
All DBs
Position
6:139363061..139370126
Genome browser
AA seq
1070 aa
AA seq
DB search
MLLIGDLGFSSLVLVVSIIIPLFGFFIRRKWRLSIVRQAEIKRLMILASEEAARAELEAS
IGYGSVPVSLNYHQCAVCYCPTTTRCARCKAVRYCSTQCQVIHWRQGHKKECYPAAVAIH
QNHGEGSDCDSGQKVTGQHQIGDGFESKEKQHAEPTESSSKESALHNSTTEPALSSSTSC
SAVLLEKDDDIKVEFQADGEGRSIASESSSTSFSGFSSSVTGSESSDDVSVCESVGSNEP
CRLEISSSADDSKLDTLWTASGVNNVDQTNLSSPKFASLVDSVDKFSKLNASNQMKPDQG
GEIQCRASGSSSCISDMYEGSTSEVRTLSSGFWGRTLEPVVSTNDVNDEAFQSNPKESGE
SASLDPGSSLHFSFSLSQNASSLPPQGLKVKAAKLDDAPRSASGYTQLSNGVTLPENVDL
DAPNVSSSSSSNSECANHVECGSTNVSPIPKPREAINRDVPLISSLSSSCSEKSDSSSVI
NGPSTSHVLKSSDAYSSSARVHVVPNAKSGNFGGVHANAATLPKVSSSSDSTHGLKTSMR
KIADQFRGSKLPKHYPLGVGNEDSGNYNDKVLFSYESFVKLYSGSKANLQPCGLVNCGNS
CYANAILQCLTFTPPLTAYFLQGLHSKACAKKEWCFTCDLENLILKAKEGKSPLSPKGIL
SQLQNICGQLVQGKEEDAHEFLRYVIDVMQFDCLKKAGVRSSGCSEEETTLIGLTFGGFL
RSKIMCVKCQGKSERYERMMDLTVEIEGDIETLEEALHRFTRTEILDGENKYQCGRCNSY
EKAKKKLTISEAPNVLTIALKRFQSGKFGKLNKAIQFPEILNLAPYMSGTSDNSPIYRLY
GVVVHLDIMNAAFSGHYVCYVKNAQNKWFKIDDSKVTSSELGNVLTKGAYMLFYARCSPR
APRSIRSRSKSILSKMNSKNYPKSSSTHPDSSGSIESFCSKYNRLQKILEEDSSSDTSSL
FSSNSDYTSSCTDSTRDDSLDSVFGDSDASSSSSSSPLYSKHSPLADLDRYGSGSPEMDP
LFHSDTSKQCRDVGSYSNSSSFRETDSELLGRVNSLKEVYFRKSLKKRTN
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgcttcttattggggatctagggttttcgagcctggtccttgtggtttccatcattatt
cctttgttcggctttttcattaggcggaaatggaggttatcaatagtcaggcaagcggag
atcaagaggcttatgattttagcctcggaggaggctgctagggctgagcttgaggcatca
attggatacggtagtgttccggtttcgcttaactatcatcaatgtgctgtttgctattgc
cctactactacacggtgtgctcgctgcaaagctgtccggtattgttctactcagtgtcaa
gttattcactggcgacaaggtcacaagaaagaatgctatccggctgcagttgccatacac
caaaatcatggcgagggaagtgattgtgattctggtcagaaggtgacggggcaacaccaa
attggagacggatttgaatctaaagaaaagcagcatgcagagccaactgaatcatcctcc
aaagaatctgcgttacataattccaccactgaacctgcactgtctagttctactagctgt
tctgcagttttacttgagaaggatgatgatataaaggttgagttccaggctgatggggaa
ggaaggagcattgcttcagaatcttccagtacttcattctctgggttttcttcttctgta
actggtagtgaatcgtctgatgatgtttctgtgtgtgagagcgttggttcaaatgagcct
tgtagacttgagatatcttcatctgctgatgactctaaacttgacacattgtggactgct
tctggtgtcaacaacgtggatcaaaccaatttgtcatccccaaaatttgccagcttggtt
gattctgtagataaattttctaaattgaatgcatcaaatcagatgaagcctgatcaaggt
ggagagatccaatgcagagcaagtggcagttcttcatgtattagtgatatgtatgagggc
tcaacttctgaggttcgtactttatcttctggtttctggggcagaactctggaaccagtt
gtatctacgaatgatgttaatgatgaggcttttcagtctaatcctaaagaaagtggtgaa
agtgcctcacttgatcctggatcttccttacatttttcattcagtttgtctcaaaatgct
tcttccttgcctccacaaggcttgaaggttaaagctgccaaattggatgatgctcctcgg
agtgcttcggggtacacccagctttctaatggagtaactttgccagaaaatgttgatttg
gatgctccaaatgtcagcagctcctcatcctcaaattctgaatgtgctaaccatgtggag
tgcgggtctaccaatgtttcacctatcccaaaacccagagaagctatcaatagagatgtt
ccgttaatcagtagcttgtcatcgtcatgttctgaaaagtcagattctagttctgttatt
aatggacctagcacttctcatgtattaaagtcttctgatgcttattcatctagtgccaga
gtgcatgtggttcctaatgctaaatctggaaattttggtggtgttcatgccaatgctgct
acgttacctaaggtttcaagttcttctgatagcacacatggattgaaaacctccatgcgg
aaaattgctgatcaattcagaggatctaagttgcccaaacactatcctttaggagttggt
aatgaggattctggaaattataatgacaaggtacttttttcttacgagtcttttgtcaag
ctttacagtgggagcaaggcgaacctgcaaccatgtggccttgtaaactgtgggaacagc
tgttatgccaatgctattctccaatgcttgacattcactcctcccttgactgcttacttt
cttcagggactccattcaaaagcatgtgcaaagaaagaatggtgtttcacctgtgattta
gaaaatttaattttgaaggccaaggagggaaaatctccattgtcccctaaagggatactg
tctcaactacaaaatatttgtggccaacttgttcaagggaaagaggaggatgcacatgaa
tttttaaggtatgttattgatgtgatgcaatttgattgtcttaaaaaagctggggtgcgt
tcatcaggttgttcagaagaagaaacgactttaataggcctaacatttggaggttttctc
cggtcaaagataatgtgtgtgaaatgtcaaggcaagtctgaacgttatgaaagaatgatg
gatcttacggttgagattgaaggagacatagagaccctggaagaggctcttcatcgcttt
acgaggactgagattttagatggagaaaataagtaccaatgtggcagatgcaactcttac
gagaaggccaaaaagaagttgacaatatcagaggctccaaatgtcctcacaattgctttg
aagcgatttcagtctggtaaatttgggaagcttaacaaagcgattcaattccctgagatc
ttgaacttggcgccgtatatgagtgggacaagcgacaattcacccatttacaggctctat
ggtgtggtggttcacttggatattatgaatgctgcattttcaggtcactatgtctgctac
gttaaaaatgcccaaaacaaatggttcaagattgatgatagcaaggtaacatcctctgaa
cttggtaatgttctaacaaaaggcgcatacatgcttttttacgcgaggtgctcacctaga
gccccaagatcgataaggagcagaagtaagtccattctatcaaaaatgaattcaaagaat
tatccaaagtcaagttcaactcatcctgatagttcagggagtatcgaatccttttgttcg
aaatacaatcggttacaaaagattttagaagaggattcatcaagtgatacttcttctctt
tttagcagcaattctgattatacttcttcctgtactgatagcacacgagatgactcactg
gattctgtatttggcgattcagatgcttcatcttcctcttcctcttctcctctttactca
aagcattcacccttagctgatttagaccgatacggttcaggttcgcctgaaatggatcct
cttttccactccgacacgagtaaacaatgtagagacgtaggtagttatagtaatagtagt
agctttagggaaactgactcagagttattaggacgagttaactcattaaaagaggtatac
tttagaaaatcattgaagaaaagaacaaattaa
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