Gossypium arboreum (tree cotton): 108486489
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Entry
108486489 CDS
T05776
Name
(RefSeq) serine/arginine-rich SC35-like splicing factor SCL30A isoform X1
KO
K12900
serine/arginine-rich splicing factor 10
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108486489
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gab01009
]
108486489
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gab03041
]
108486489
Protein phosphatases and associated proteins [BR:
gab01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108486489
Spliceosome [BR:
gab03041
]
Common components
Common spliceosomal components
SR proteins
108486489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
108486489
NCBI-ProteinID:
XP_017646055
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All DBs
Position
8:119917585..119920734
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AA seq
261 aa
AA seq
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MRGRSYTPSPPRGYGRRGRSPSPRGRYGGRARDLPTSLLVRNLRHDCRPEDLRRPFERFG
PLKDIYLPKDYYTGEPRGFGFVQYVDPADAAEAKYQMDGQVLLGRELTVVFAEENRKKPA
EMRHRERARGGRYRDRRRSPPRYSRSPRYSRSPPRHGRYRSRSRDYSPPKDRHYSRSVSP
QDGHYSRDRYSRSPPYNVSRSCSRSLERGQGPSQGRSRSPRRSRSHSPREAGSPIRSRSR
SRSPYHEEYKRELNGERSPSQ
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgagaggcagaagttatactccatctccgcccagaggctacggccggagaggacggagc
cctagccccagaggccgctacggtggtcgcgctcgagatcttcctacaagccttttggtt
cgcaacctccgccatgactgcaggccagaagacctccgcaggccattcgaaagatttggc
cctcttaaagatatatatctgcccaaggattattatactggggaacctcgggggtttggt
tttgtccaatatgttgatcctgctgatgctgctgaagccaaataccagatggatgggcag
gttcttcttggtcgagagttgactgtggtctttgctgaagaaaacaggaagaaaccagct
gaaatgaggcacagagagcgagcaagaggaggtcgatatcgtgataggagaaggtcccct
cctcgttactctcgttcgcctcgatattcacggtctccacctcgtcatgggagatatagg
tctcgaagtcgtgattattcacctcctaaagataggcattactcgagatcagtttcaccc
caagatggacactacagccgagataggtattcacgttctccaccatacaatgtctcgagg
agctgtagccggagtctagaaaggggccaaggcccaagccagggaagaagccgaagccct
agacggagcagaagccacagcccaagagaagctggaagcccaatcagaagcagaagccgt
agccggagtccataccatgaggaatacaagagggaactcaatggagaaaggtctcccagt
caatga
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