Gossypium arboreum (tree cotton): 108486503
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Entry
108486503 CDS
T05776
Name
(RefSeq) probable alpha-mannosidase At5g13980 isoform X1
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
108486503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108486503
Enzymes [BR:
gab01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
108486503
Membrane trafficking [BR:
gab04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
108486503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Laman-like_dom
Glyco_hydro38C2
Motif
Other DBs
NCBI-GeneID:
108486503
NCBI-ProteinID:
XP_017646079
LinkDB
All DBs
Position
1:13088980..13098496
Genome browser
AA seq
1006 aa
AA seq
DB search
MAVHGAWILILVTLMSIWCVEPKYIIYNTTSKIVPGKLNVHLVAHTHDDVGWLKTVDQYY
VGSNNSIQGACVQNVLDSIVPALLADKNRKFIYVEQAFFQRWWRDQSETVQETVKRLINS
GQLELINGGMCMHDEAAPHYIDMIDQTTLGHRFIKREFNITPRIGWQIDPFGHSAVQAYL
LSAEVGFDSLFFARIDYQDRAKRKDEKSLEVVWRGSKSLGSSSQIFAGAFPENYEPPSNF
YYEVNDDSPIVQDNMELFDYNVPQRVNEFVAAALSQANITRTNHVMWTMGTDFKYQYAHT
WFRQMDKFIHYVNQDGRVNALYSTPSIYTDAKYATNEAWPLKTDDYFPYADRINAYWTGY
FTSRPALKGYVRTMSGYYLAARQLEFLKGRSKAGPNTDYLADALALAQHHDAVSGTSKQH
VANDYAKRLSIGYEEAAKVVETSLASITRSSSKTDSGNKVTMFQQCLLLNISYCPLSEVD
LSNGKNLVVVVYNPLGWKREDIIRIPVIDGNVIVKDHRGNEIESQLVPLLNASLAIRNYY
SMAYLGKFPSVTPKYWLAFSASAPPLGLNTYFISSGKQKAAPSKNQVVYSSKEKQKDVIE
VGPGDLKLVFSAKQRKLIGYINSRTKVKETVRQSYSFYTGATDIKQASGAYIFLPNGTNS
LKPDHQALTVLRGPILDEVHQRINSWIYQITRVYKGKEHAEFEFIVGPIPISDGIGKEVV
TKILTHMKTSKTFYTDSSGRDFLERIRNYRKDWNLDVNQPVAGNYYPINLGMYVKDDDKE
LSVLVDRSVGGASIKDGELELMLHRRLLHDDGRGVAEALNETVCVQNKCSGLTIVGKYYL
RIDPLGEAAKWRRSFGQEIYSPFLLAFTQQEGDGWTNSHVSSFSGMDPSYVLPDNVAMIT
LQELDNGQVLLRLAHLYEVGEDKDLSVMASVQLKKVFAHKKINKVTEMSLSANQGRVEME
KKRLVWKVKGSPEEVPKVVRGGPVDPAALVVELAPMEIRTFVIDFN
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atggctgttcatggggcgtggattttgattttggtcacgttgatgagcatttggtgcgtt
gaacctaagtacattatttacaatactacgtcgaagatagttcccgggaaactcaatgtt
catttggttgctcatacgcatgatgatgttggttggttgaaaactgttgatcagtactat
gtcggctccaataattccattcagggagcttgtgtccagaatgtcctggattctattgtg
ccggcattattagctgacaagaacaggaagttcatttacgttgaacaggcatttttccag
agatggtggagagatcagagtgagacagttcaagagacagtaaagcggcttatcaactct
ggtcaactagagttaataaatggaggcatgtgtatgcatgatgaagctgccccacattac
atcgacatgatcgatcaaacaactctcggccatcgatttatcaaacgagaatttaatatc
accccaaggattggttggcaaattgatccctttggacattctgcagtgcaagcttacttg
ttgagcgcagaggttggatttgattcccttttcttcgcacgaattgattaccaagacaga
gctaaaaggaaagatgagaagagccttgaagttgtttggcggggatccaagagtcttggc
tcatcatcacagatatttgctggtgcattccctgagaattatgagcctccaagtaatttc
tactatgaagttaatgatgattcacctattgtccaggataacatggagctgtttgactac
aatgttccccagcgtgtgaatgagtttgtagcagcagcattgtctcaggctaacataact
cgaacaaatcatgtgatgtggactatgggaacagatttcaagtatcaatatgcacacaca
tggttccggcaaatggacaagttcattcattatgttaatcaagatggacgtgtgaatgcc
ctatattctaccccatcgatatatactgatgcaaaatatgctacaaatgaagcttggcca
ctgaagactgatgactactttccatatgcagaccgtataaatgcctactggactggatat
tttacaagccggcctgcactcaaaggttatgttaggacaatgagtggctactatttggca
gcaagacagttagaattccttaagggaagaagtaaagctggaccaaacactgactattta
gccgatgctttggcacttgctcaacatcatgatgcagtcagtggcacttcaaagcagcac
gtggctaatgactatgcgaaaagactatccattggctatgaggaggctgcaaaggtggtc
gaaacatcgcttgcctctataacaaggtcctcttcaaagacagacagtgggaacaaagtg
accatgtttcagcagtgcttgcttctgaatataagttattgtcctttgtcagaggttgat
ctgtcaaacggcaaaaatctggtggttgttgtatacaatcctttgggatggaaaagggag
gacattatacgaatcccggttattgatgggaatgtcatcgttaaggatcatagaggaaat
gaaatcgaatcgcagcttgtacctctgctaaatgcttctttggccataagaaattactat
tccatggcatatttgggtaaattcccaagtgttaccccaaagtattggcttgcattttca
gcttctgcacctcctctcgggttaaatacttacttcatctcaagcggaaaacaaaaagca
gctccttcaaagaaccaagtagtgtacagttctaaagaaaaacaaaaagatgtaatcgaa
gtagggccaggcgacctgaaacttgtgttctctgctaagcaacgaaaactcattggctac
attaatagcagaactaaggtgaaagaaactgtaaggcaatcatatagcttttataccgga
gcaactgacataaaacaggcctctggagcatacatctttctaccaaatggcacgaattca
ttgaaacctgatcaccaggctttgactgttttacggggacctattttggatgaagtacac
cagagaatcaattcatggatatatcagatcacaagagtgtacaagggaaaggagcatgca
gaatttgagttcattgttggtcctattccgatcagtgatggaattggaaaagaagttgtg
actaagattttaacgcatatgaaaaccagcaaaacattctatacagattccagtggtcgt
gatttccttgaaaggattcgaaactatcgaaaagattggaacctggacgtgaatcagcct
gttgcaggaaactattaccctattaatcttgggatgtatgttaaagatgacgataaggag
ctttcagtcttagtagatcgatccgtgggtggagccagcattaaggatggtgaattggaa
ctaatgctccataggaggttgcttcatgatgatggtagaggtgttgcagaagccctaaat
gaaacagtctgtgttcaaaataagtgcagtggactaactatcgttgggaaatattacctc
agaatcgatcctctgggagaggcagctaagtggcgtcgatcatttggtcaggagatatat
tctccatttctcttagcctttactcagcaggaaggagatggatggactaattcccatgtc
tcatccttttctgggatggatccgtcctatgttttaccagataatgtagcaatgataacc
ctccaggaattggacaacgggcaagttcttcttcggctggcacacttatacgaggttggg
gaggacaaggatctctcagttatggcaagtgtacagcttaaaaaagtatttgcacataag
aagataaataaagtaacagaaatgagcttatctgctaaccaaggaagagtcgaaatggaa
aagaagaggctggtgtggaaagtcaaaggctcccccgaagaagtgccaaaagtagtgaga
ggtggaccggttgatccggctgcattggtggttgaacttgctccgatggaaatcagaacc
tttgtcattgacttcaattag
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integrated database retrieval system
