Gossypium arboreum (tree cotton): 108486576
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Entry
108486576 CDS
T05776
Name
(RefSeq) SNW/SKI-interacting protein A-like
KO
K06063
SNW domain-containing protein 1
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108486576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gab03041
]
108486576
Spliceosome [BR:
gab03041
]
Complex B
Other components
Prp19-related factors
108486576
Complex C
108486576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
108486576
NCBI-ProteinID:
XP_052885641
LinkDB
All DBs
Position
6:complement(126408214..126410568)
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AA seq
607 aa
AA seq
DB search
MAALKDLLPDAKNSTSTYYDHANDPWFKQRFSTSEEEKSTVVTAKPVPPYLKRAGFVPRK
VEDFGDGGAFPEIHIAQYPLDMGRVKGAKPGSKILPVTVDARGNLAYDAIVKQNENAKKI
VYSQHKDLIPKILRNEEEGDDEGEEEEEMQKEIEETMQETKAALEKIVNVRLSAAQPKNV
PKQSSDSKYIKYKPSQQSAAFNSGAKERIIRMVEMPVDPLEPPKFKHKRVPKASGSPPVP
VMHSPPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQEVQINDNFAKLS
EALYVAEQKAREAVAMRSKVQKEMMMKEKERKEQELRALAAKARSERTGTVAPSTAVPMS
SDRSVMDTDTRVDYEPARERERDMPKESKEEREERLQRAKIREERRRERERERRLEAKDA
AMGKKSKITRDRDRDISEKVALGMASTGAGRGGEVMYDQRLFNQEKGMDSGFATDDQYNI
YDKGLFTAQPTLSTLYRPKKDVDSEMYGGADEQLEKIMKTERFKPDKAFAGTSEKSGPRD
RPVEFEKEVEEADPFGLDQFLTEVKKGKKAMDKVGSGGTMKASAGSSMRDGYEGGSNRSR
INFERGH
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcggctttgaaggatcttttaccagatgcgaaaaactcaacgtcgacctattatgat
cacgcgaatgatccttggtttaaacaacggtttagtacgtcggaggaagagaaatccact
gtcgtaacggcgaagccagtaccgccttacttgaagcgcgccggatttgttcctaggaaa
gttgaagactttggagatggaggagctttccctgaaatacatattgctcaatacccgctt
gatatgggaagggttaaaggggcaaaacctggatcgaagattcttccggtgactgttgat
gctcgtgggaatttggcttatgatgcaatagttaagcagaatgagaatgccaagaagatt
gtttattcgcagcataaggatttaattcctaagattttgaggaatgaggaagagggtgat
gatgagggggaagaagaggaggagatgcaaaaagagatcgaggaaactatgcaagaaact
aaggcggctttagagaagatagttaatgtgagattgagcgctgcacagcctaagaatgtt
ccgaaacagtcttcggattcaaagtatattaagtataagccttcacagcaatcggctgcg
tttaattcaggtgctaaggagaggataattagaatggtagagatgcctgttgatcctctt
gagcctcccaagtttaagcataagagggtacctaaggcttcgggatctccaccagtgcca
gtgatgcattcccctccacgtcctgttactgtgaaggatcagcaggactggaaaattcca
ccttgtatttcaaactggaagaatccaaaagggtatactattccgctggataagcgactt
gctgctgatggaagaggtttacaggaggttcagattaacgataactttgcaaagctgtct
gaggctttgtatgttgcagagcagaaggctagagaagctgtggcaatgagatcaaaggtg
cagaaagagatgatgatgaaggagaaggaaaggaaggagcaggagttgcgagctttagct
gctaaagcccgttctgagagaactgggacggtggcaccatctactgctgttccaatgtca
tctgatagaagtgtgatggatactgatacgagagtggattatgagcctgcgagggaaaga
gaaagggatatgccaaaggaatcgaaggaagaaagggaggagcggttgcagagggcgaag
atacgtgaagagcgtcgtagagaaagggagagagagagaaggttggaggccaaagatgct
gccatgggtaaaaagagtaagattacaagagatagagatagagatattagtgaaaaagtt
gctcttggtatggcttctactggtgctggaagaggtggggaagtaatgtatgatcaaagg
ttatttaaccaggagaaaggaatggattctggatttgcaactgatgatcaatacaacatc
tacgacaagggtctattcacagcgcaacctactctctcgacactctacaggccaaagaaa
gacgtggattcggaaatgtacggtggtgctgatgagcagttagagaaaataatgaaaact
gagaggtttaaacctgacaaggcgtttgctggtacttctgagaagagtggtccaagagac
aggccagttgagtttgaaaaggaagttgaagaagctgatccattcggtcttgaccagttc
ttgacagaggtcaagaagggcaagaaagccatggacaaagtgggtagtggagggacaatg
aaagcaagtgcaggttcgtccatgcgagatggctatgaagggggatctaatagatctcgc
attaatttcgaaagaggacattaa
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