KEGG   Gossypium arboreum (tree cotton): 108486619
Entry
108486619         CDS       T05776                                 
Name
(RefSeq) THO complex subunit 4A
  KO
K12881  THO complex subunit 4
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab03013  Nucleocytoplasmic transport
gab03015  mRNA surveillance pathway
gab03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108486619
  09122 Translation
   03013 Nucleocytoplasmic transport
    108486619
   03015 mRNA surveillance pathway
    108486619
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gab03019]
    108486619
   03041 Spliceosome [BR:gab03041]
    108486619
Messenger RNA biogenesis [BR:gab03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     108486619
    TREX complex
     108486619
Spliceosome [BR:gab03041]
 Complex C
  Other components
   EJC/TREX
    108486619
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    108486619
SSDB
Motif
Pfam: RRM_1 FoP_duplication
Other DBs
NCBI-GeneID: 108486619
NCBI-ProteinID: XP_017646250
UniProt: A0A0B0Q0F3
LinkDB
Position
13:complement(129070699..129072723)
AA seq 238 aa
MSSALEMSLDDLIKRNRKPRSGKSRGRGRGSGPGPARRFPNRGANRSAPYAAAKVLETTR
QQDMFSDKGAALQGLAGRNSGIETGTKLYISNLDYGVSNDDIKELFSEVGDLKRFSVHYD
RSGRSKGKADIVFTRRADALAAVKRYNNVELDGKPMKIEIVGTNIATPPAPLGANGAFRS
SNGAMKGGQGKGGGFGRQRGGGAAGRGRGRGKGRGEKVSAEDLDADLEKYHSESMQTN
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcaagtgctttagagatgtcgctcgacgatctcatcaagcgtaaccgtaagccgaga
tccggcaaatctcgcggccggggacgtggatccggacctggaccggcccgccgttttcct
aatcgtggagcaaaccgctcggcaccgtatgctgctgctaaggtgctggagacgacgcgg
cagcaggatatgttttccgataagggagcggcgttgcaaggactagcgggtcggaattct
ggaatagaaaccggaacgaagctctatatctctaatttagattacggtgtttcaaacgac
gacatcaaggaattgttttctgaggtcggtgacctgaaacgattttcggtccactatgat
aggagcgggagatcgaagggaaaagcagatattgtcttcacacggcgagcagatgctttg
gctgcagtaaagaggtacaacaatgttgagcttgatgggaagccgatgaaaatcgagatt
gttggaacaaacatcgctacccctcctgcacctttaggagctaatggtgcctttcgaagt
tctaatggagccatgaaaggtggccaaggcaagggtgggggatttggtaggcaacgtggt
ggtggtgctgctggaagaggccgtggacgagggaagggtcgtggagaaaaggtttctgca
gaagatcttgacgccgatctagagaagtatcattccgaatcaatgcagacaaattga

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