Gossypium arboreum (tree cotton): 108486638
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Entry
108486638 CDS
T05776
Name
(RefSeq) LOW QUALITY PROTEIN: ABC transporter G family member 32
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108486638
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gab02000
]
108486638
Transporters [BR:
gab02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
108486638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_16
AAA_29
AAA
AAA_25
DO-GTPase1
AAA_28
AAA_30
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
108486638
NCBI-ProteinID:
XP_052885205
LinkDB
All DBs
Position
6:131549643..131558709
Genome browser
AA seq
1420 aa
AA seq
DB search
MWNSAENVFSRSASFREEEDDEEALRWAALERLPTYSRVRRGIFKDIVGDSKEVDVSELE
STDQRLLLERLVNSVDDDPERFFDRMRKRFDAVDLEFPKIEVRFQNLTVESFVHVGSRAL
PTIPNFIFNMAEAFLRRLRIYQGRRSKLTILDGCSGIIRPSRLTLLLGPPSSGKTTFLLA
LAGRLGSHLQMLGKISYNGHGLKEFVPPRTSAYVSQQDWHVAEMTVRETLEFAGRCQGVG
VKYDMLLELARREKNAGIKPDEDLDIFMKSLALGGKETSLVVEYIMKILGLDICSDTLVG
DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYMRHSTGALDGTT
VISLLQPAPETYELFDDVILLCEGQILYQGPRDAALDFFAFMGFRCPERKNVADFLQEVL
SKKDQEQYWSLPFNPYRYXPPGKFAEAFRSYQIGKNLHEELSIPFDSRYNHPLALSTSRY
GVKKSELLKISFDWQMLLMKRNSFIYIFKFIQLFIVALITMSVFMRTALHHNTIDDGGLY
LGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWAYTLPSWLLSIPTSLYESG
FWVAISYYVIGYDPDITRFLRQFLLYFCLHQMSIALFRVIGSLGRNMIVANTFGSFAMLV
VMALGGYIISRDRIPSWWIWGYWVSPLMYAQNAASVNEFLGNSWHKRAGNYTNFSLGEAL
LRARSYFPESYWYWIGVGALLGYTVLLNLLFTFFLANLNPLGKQQAVFSKEELQERDRRR
KGENVVTELRHYLQNSGSFNGKYFKQRGMVLPFQPLSMSFSNINYFVDIPVELKQQGITE
DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGXKTGGLIEGSIHISGFPKRQET
FARISGYCEQNDIHSPCLTVLESLLFSAWLRLPSDVGLETQRAFVEEVMELVELTPLSGA
LIGLPGVDGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARSAAIVMRTVRNIVNTGR
TIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGPKSCELIKYFEAVEGVPKIRPGYN
PAAWMLEVTSTAEENRLDVDFAEIYRRSNLFQRNRELVENLSKPSGNSKELNFPSKYSQS
FFEQFLTCLWKQNLSYWRNPQYTAVKFFYTVVISLMLGTICWKFGSKRESQQDLFNAMGS
MYAAVLFIGITNATAVQPVVSIERFVSYRERAAGMYSGLAFAFAQVAIELPYVFAQSVIY
CSIFYSMASFEWTALKFIWYTYFMYSTLLYFTFYGMMTTAVTPNHNVAAIIAAPFYMLWN
LFCGFMIPHKRIPIWWRWYYWANPIAWSLYGLVISQYGDDDKLVALSNGVDSMPTRVLLK
EVFGYRHDFLCVTAVMVGFFVIFFAVIFGFAIKAFNFQRR
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atgtggaactcggcggagaacgtgttctccaggtcggcttcgttcagggaggaggaggat
gatgaggaggcgctaagatgggcggcgctggagaggctgccgacgtactcgagagttcga
aggggaatattcaaggacatagttggtgactccaaagaagtggatgttagcgagctggag
tctaccgaccaaaggcttttgctcgaacgcctcgttaactctgttgatgacgatcctgaa
cgcttttttgatcgtatgaggaaacgattcgacgcagtggatttggaattcccgaaaatt
gaggttcggtttcagaatctaactgttgaatcttttgtccatgttgggagcagagcatta
ccaaccattcccaattttatttttaacatggctgaggcatttttgagacggttgcgtata
tatcaaggaaggagaagcaagttgactatattagatggatgtagtgggattataaggcct
tcacgattaacgttattattgggccctccaagctctggaaagacgacgtttttgttggcc
ttggctggacgccttggatctcatttgcagatgttggggaaaatttcgtataatggacat
ggactaaaggaatttgttcctccgaggacatctgcttatgtcagtcaacaggactggcat
gtagctgaaatgactgtgagggaaacccttgaatttgcaggaaggtgtcaaggtgttgga
gttaagtatgatatgcttttggagcttgcaagaagggaaaagaatgctgggataaaaccc
gatgaagatctcgatatctttatgaagtcactagctttgggggggaaagagacgagcctc
gtggtagaatacatcatgaagattttggggttggacatatgttctgacacgttggtggga
gatgaaatgcttaaaggtatttcaggggggcagaaaaagcggcttacaacaggtgaatta
ttagttggcccagctagagtgttgttcatggatgaaatatcaaatgggcttgatagttct
actacttaccaaattattaaatatatgagacactctactggtgcactggatgggaccact
gtaatttctctgcttcagcctgctccggaaacttatgagttgtttgatgatgttatactt
ttatgtgagggccagattttataccaaggtcctcgtgatgcagcccttgatttctttgct
tttatgggatttagatgtccagaaagaaagaatgtggcagacttcttgcaagaggttttg
tcgaaaaaggatcaagagcagtattggtctcttcctttcaatccttatcgttacnatcct
ccaggaaaatttgccgaggctttccgatcctatcaaattgggaagaatttgcatgaggaa
ctaagcattccatttgatagtcgctataaccatcctttagcactttcaacttctcgctat
ggcgtgaagaagagtgaacttctaaagatcagctttgactggcaaatgctactgatgaaa
cggaattcatttatctatattttcaaatttattcagctttttattgttgccttaattact
atgagcgtttttatgcggacggcactgcaccataatacaattgatgatggaggattgtat
ctaggggcactatacttttccatggttattattctttttaatggatttacggaggtttca
atgttggtggccaaacttcctgttctttacaagcatagggatttgcatttctatccaagc
tgggcttatacgctaccttcttggctgctaagtattccaacttctctctatgagtctggt
ttttgggtggcaatttcatactatgtgattggttatgatcctgatatcaccagatttctt
cggcagttcttgttgtatttctgtctgcaccagatgtctatagctcttttccgtgtaata
ggatccttgggaagaaatatgatagttgccaacacttttgggtcttttgctatgttggtg
gtcatggctctaggaggctatattatttcaagagatcgtatacctagctggtggatctgg
ggttattgggtttctcctttgatgtatgctcaaaatgcagcttctgtcaatgaattcctt
ggaaattcctggcataagagagctggaaactacactaacttctcattgggtgaggcatta
ttgagagcacgaagttattttccagagagctactggtattggataggcgttggtgctttg
ctgggatacacagttttgttgaatctcctgttcacattctttcttgctaaccttaaccct
ctggggaagcaacaggctgttttctccaaggaagaactgcaagagagagacaggagaagg
aagggtgaaaatgttgttaccgagctgagacattatttgcagaactcaggctcatttaat
ggaaaatatttcaagcagagaggcatggttctcccatttcaaccactttcgatgtctttc
agcaatataaattactttgtagatatccctgtggaattgaagcaacaagggataacggaa
gatagattgcagttgttggtcaatgttactggagcatttagaccgggtgtgcttacggct
ttggtcggtgtcagtggtgctggtaaaactacactcatggatgttttagctggtncgaaa
accggagggctcatagaagggagcatacatatatcgggttttcccaaaagacaagaaact
tttgcaagaatttcaggttactgtgagcagaatgatatccattctccctgtttgactgtt
ctggaatctcttttattctctgcttggcttcggttaccatcagatgttggcttggagaca
cagagggcgtttgtcgaggaggtgatggaacttgtggagcttactccattaagtggggca
ttgattggtctgccaggagttgatggcttatccactgaacaacggaaaaggctgactatt
gctgttgaactggttgccaacccttctatagtcttcatggatgagcctacgtcaggattg
gatgctagatctgctgccattgtaatgagaactgtcagaaacattgtcaatactggacga
acaattgtgtgcaccatccatcagcccagcatagacatttttgaatcctttgatgagctt
ttattcatgaagcgtggaggagagctcatatatgctggtccacttggccccaagtcttgc
gaactcattaagtattttgaggcagttgaaggagtgccaaagatcagacctggctataat
cctgctgcttggatgcttgaggttacttcaacagctgaagaaaatcgtctggatgtggac
tttgcagaaatttatcgtagatcaaatctatttcagcgcaacagggagttagttgaaaac
ttaagcaagccaagtggcaactcgaaagaactgaactttccatccaagtattcccaatca
ttttttgaacagtttttaacatgtctttggaagcaaaatctatcttattggcgaaacccc
caatatacagcagttaaattcttctacactgttgtcatctcgctgatgcttggaactata
tgctggaaattcggttcaaaaagggagagccagcaagatctattcaatgccatggggtcc
atgtatgctgcagtcctcttcattggaatcacaaatgcaaccgccgttcaacctgttgtt
tctattgagagatttgtttcataccgagaaagagccgccggaatgtattcaggcctagcc
tttgcatttgctcaggttgccattgagctcccatacgtgtttgcacaatcagtaatatac
tgttcgattttctactccatggcctcatttgagtggactgctttgaaatttatatggtac
acatacttcatgtactcaacattgctatatttcaccttttacggaatgatgacgaccgcg
gtcacaccaaatcataacgtggctgctatcatcgctgctccgttttatatgctttggaac
cttttctgcggctttatgattccacacaagagaattcctatatggtggagatggtattac
tgggcaaaccccatagcttggagtttgtatggcctcgtgatttcgcagtatggcgatgac
gacaagctcgtcgcgctatcgaatggagtagactcgatgcctacgcgagtgttgctcaag
gaagtgtttgggtataggcatgatttcttgtgcgtaactgctgttatggtagggtttttt
gtcatctttttcgcagtaatctttggttttgctataaaagccttcaatttccagaggaga
tga
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integrated database retrieval system
