Gossypium arboreum (tree cotton): 108486729
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Entry
108486729 CDS
T05776
Name
(RefSeq) alkylated DNA repair protein alkB homolog 8
KO
K10770
alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.-
2.1.1.229
]
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gab03016
]
108486729
Enzymes [BR:
gab01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.229 tRNA (carboxymethyluridine34-5-O)-methyltransferase
108486729
Transfer RNA biogenesis [BR:
gab03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
108486729
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Methyltransf_11
Methyltransf_25
Methyltransf_23
Methyltransf_12
Methyltransf_31
MetW
Ubie_methyltran
OYE-like_second_a-b
Methyltransf_9
DUF2226
Motif
Other DBs
NCBI-GeneID:
108486729
NCBI-ProteinID:
XP_017646418
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Position
8:complement(44903354..44906049)
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AA seq
390 aa
AA seq
DB search
MIFKSLRAGIYVHQFWSKSTLFLDCICGLGYSVISSSMKEIKVKDASPMCTLAPDTEPRI
QPSSSVSEDRKCSSISVKSTPEIEKKYVHHVYDAIAPHFSSTRFAKWPKVAAFLESLPTG
SLILDAGCGNGKYLGLNSSCYFIGCDISPSLIKICANRGHEVLVADAVNLPYRTNFGDAA
ISIAVLHHLSTENRRKKAIEELVRVVKKGGLVLITVWAVEQEDKSLLTKWTPLTERYLEE
WIGPGSPCVRGSSSFTLESIPETEENGLGGHPKDSRVSLTENMQQSSCSTPQNEDDSMVS
RDGKSQQEYFVPWHLPYHRAEVSGASAGALANGLAKKDDKKGAVVYNRYYHVFGEGELER
LVSGMDNAVIVDKFYDKSNWCIILEKTLEG
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgatttttaaatctcttagagctggtatatacgttcatcaattttggagtaaaagcact
ctattccttgattgtatctgtggacttggttattcagtaatttctagcagtatgaaagaa
atcaaagtaaaagatgcttctcctatgtgtactcttgcacctgatactgaacccagaatc
caaccatcttcctctgtaagtgaggaccgtaagtgttcatctataagtgtgaaatctacc
cctgaaatagaaaagaaatatgttcatcatgtttatgatgctattgccccccattttagt
tccacccgctttgccaagtggccgaaggttgctgctttcttggaatctttgcctactggt
tcacttatcttagatgcaggatgtggaaatgggaaatatctaggtttaaattctagctgc
tattttataggatgtgatataagtccttcccttatcaaaatatgtgctaatagagggcat
gaagttttggttgcagatgctgttaatcttccttacagaactaattttggtgatgcagca
atctctattgctgtgttacatcacttaagtacagagaataggagaaagaaagcgattgaa
gaattagtgcgagttgttaaaaagggtggcctagttctaataaccgtttgggctgttgaa
caagaggataagtcattacttaccaaatggactccacttacagaaaggtatttagaagag
tggataggaccaggtagtccttgtgttcgtggctcttcatccttcactctagaaagcatt
cctgaaactgaggaaaatggtttgggtgggcatccaaaagattctagagtgagtttaact
gagaatatgcaacaatcatcatgctcaaccccccaaaatgaagatgattcaatggtttct
agagatggaaagagtcagcaggaatattttgtcccttggcacttaccttatcaccgtgct
gaagttagtggtgcctctgctggtgctctagcaaatggtttggcaaagaaagatgataag
aagggtgctgtagtgtacaacagatattaccatgtgttcggtgaaggcgagcttgagagg
ttggtatcgggaatggataatgctgtgattgttgataagttttatgacaaatcaaactgg
tgcatcattcttgagaaaacattagaaggataa
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