Gossypium arboreum (tree cotton): 108486758
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Entry
108486758 CDS
T05776
Name
(RefSeq) zinc finger protein GAI-ASSOCIATED FACTOR 1-like
KO
K25869
zinc finger protein IDD1/2
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gab03000
]
108486758
Transcription factors [BR:
gab03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108486758
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-met
zf-C2H2_jaz
zf-C2H2_4
zf-C2H2_STOP2_C
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
108486758
NCBI-ProteinID:
XP_017646460
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All DBs
Position
5:17323301..17326364
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AA seq
495 aa
AA seq
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MVELENSSAMTVSTASGEATASSLGNQIQDNQLTGGGPPKKKRNLPGMPDPDAEVIALSP
KTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTSKEIRKRVYVCPEPSCVHH
NPARALGDLTGIKKHFCRKHGEKKWKCERCSKKYAVQSDWKAHMKTCGTREYKCDCGTIF
SRRDSFITHRAFCDALAEESVRTQTIGVANPEGNINVNGNGSGNTTMVGGGAAATLPPPQ
PLTPSTTSVVSPGLSIQSSEVPENPMGLSPAAATTATTNVFASIFAPNSQPSKISAPSSF
LQATTPLERTSLSLSSPLYLSNNGSSIFTGPENDHCHYAPSPQPAMSATALLQKAAQMGA
AASNPSLLRGLGLAVSSASPAGQDPNVKSESNTATASLGLGFPSNGSSGLTNPIIGSSSL
FGNKPTTLDLLGLGMADSGASSSGLSALLTSFGGGFNVGAATATSYGAGGSNNSPRETWE
GGAERKPNGPANAML
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggtagagctggaaaattcgtcggcgatgactgtttctacagcttctggagaagccact
gcatcttctctaggtaatcagattcaagacaatcaactcacaggcggaggaccaccgaag
aagaaaagaaatcttccagggatgccagatccagatgctgaggtgatagctttatctccc
aaaaccctactggcgaccaaccgattcgtttgtgagatctgcaacaaaggcttccaacgt
gatcaaaacctgcaactccaccgacggggccataacttaccatggaagctacgccaaagg
acaagcaaagaaattcgaaagcgagtctacgtgtgccccgagccgagttgcgtccaccac
aaccctgctcgagccctcggtgatctcaccggtatcaagaaacacttttgcaggaaacac
ggggaaaagaaatggaaatgcgagcggtgttctaaaaagtacgccgttcagtccgattgg
aaggcccacatgaagacttgcggcacccgagaatataaatgcgattgtggcaccatcttt
tctaggagggatagttttataacgcatagagctttctgcgatgcgttagctgaggaaagt
gtgaggacccaaacaataggtgttgctaatcctgaaggaaacattaacgtgaacggaaat
ggaagtggtaacaccactatggttggaggaggagctgcagcaacattgccaccacctcag
cctttaacaccgtctaccactagcgtagtttcaccgggtttatcaattcagagttcagaa
gtaccagaaaatccaatgggactttcaccagcagcagctactacagcaaccactaatgtt
ttcgctagcatatttgcacccaactctcaaccatccaaaatctcagcaccctcgtcgttc
cttcaggcgacgacaccattggagcgcacatccctctcgctttcctctccactctaccta
tccaacaatggctcctccatctttaccggacctgaaaacgaccattgccactatgctcca
tctccccagccagcaatgtccgctactgcattgctacaaaaagctgcccaaatgggtgcc
gcggcttccaacccttcattgcttcgaggtctaggcttggcagtatcatcagcttcccct
gctggtcaagatcctaacgttaagtccgagagcaatacagcaacagccagtctcggcctt
ggcttcccctcaaacggaagttctgggttaaccaatcccattattggctcatcctcgctg
ttcggaaacaagcctacaacgctcgatcttcttggcctcggcatggccgacagcggagct
tcctcaagtggactatccgcgttgctcacttcctttgggggtggcttcaatgtaggagcg
gcaaccgccacgtcgtacggagcaggagggagtaataattcgcctagagaaacctgggaa
ggtggagctgaaagaaaacccaatggcccagccaatgccatgctttag
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