KEGG   Gossypium arboreum (tree cotton): 108487016
Entry
108487016         CDS       T05776                                 
Name
(RefSeq) ras-related protein RABF1
  KO
K07887  Ras-related protein Rab-5A
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab04144  Endocytosis
gab04145  Phagosome
gab04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:gab00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    108487016
   04145 Phagosome
    108487016
   04148 Efferocytosis
    108487016
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gab04131]
    108487016
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gab04147]
    108487016
   04031 GTP-binding proteins [BR:gab04031]
    108487016
Membrane trafficking [BR:gab04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    108487016
 Endosome - Lysosome transport
    108487016
Exosome [BR:gab04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   108487016
  Exosomal proteins of other body fluids (saliva and urine)
   108487016
  Exosomal proteins of colorectal cancer cells
   108487016
  Exosomal proteins of bladder cancer cells
   108487016
GTP-binding proteins [BR:gab04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    108487016
SSDB
Motif
Pfam: Ras Roc Arf RsgA_GTPase Gtr1_RagA GTP_EFTU MMR_HSR1 ATPase AAA_7 AAA_16 P-loop_TraG TniB
Other DBs
NCBI-GeneID: 108487016
NCBI-ProteinID: XP_017646705
UniProt: A0A0B0P3M6
LinkDB
Position
10:complement(121759546..121763986)
AA seq 201 aa
MGCSSSLPDRSSGRSTGLNNADNPEGPDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDP
TSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAGVAVIVYDITSPE
SFTKAQYWVKELQKHGSPGIVMALVGNKADLQEKREVPVQDGIDYAEKNGMFFIETSAKT
ADNINQLFEEIAKRLPRPSPS
NT seq 606 nt   +upstreamnt  +downstreamnt
atgggttgctcttcttctctcccagatcggagttccgggcggtccactggacttaacaac
gcggacaatcctgaaggtcccgatgccaaaaatctacgcgtaaagctggtcttgttaggt
gattctggagttggaaaaagttgtattgttcttcgctttgttcgtggccagtttgaccct
acatctaaggtaactgtaggagcttcattcttgtcacagacaatagctttgcaagattca
actactgttaagtttgaaatatgggacactgctggacaagagaggtatgctgcattggca
cctctctactacagaggagctggagttgcagttattgtgtatgatataactagtccagag
tccttcaccaaagcacagtattgggttaaggagctacaaaagcatgggagcccaggtata
gtgatggccttggttggtaataaagccgaccttcaggaaaagcgcgaagtaccagtccaa
gatggcattgactatgcagagaagaatgggatgttctttattgagacatctgccaagact
gcggacaatataaatcagttgtttgaggaaattgccaagcggctgccacgtccatcacct
tcatga

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