Gossypium arboreum (tree cotton): 108487116
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Entry
108487116 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108487116 isoform X1
KO
K13137
serine-threonine kinase receptor-associated protein
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gab03041
]
108487116
Spliceosome [BR:
gab03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
108487116
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EIF3I
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
ANAPC4_WD40
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_NWD2_C
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_Vps41
eIF2A
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
108487116
NCBI-ProteinID:
XP_017646847
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Position
10:10038181..10042622
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AA seq
339 aa
AA seq
DB search
MEKKKVALPLVCHGHSRPVVDLFYSPITPDGYFLISASKDSTPMLRNGETGDWIGTFEGH
KGAVWSSCLDTNALRAASASADFSAKLWDALTGDELHSFEHKHIVRACAFSEDTHHLLTG
GVEKILRIFDLNRLDAAPREVDNSPGSVRTVAWLHSDQTILSSCSDTSGVRLWDLRSGKI
VQTLETKSPVTSAEVSQDGRYITTADGSTVKFWDSNHFELVKSYDMPCNVESASLEPKHG
NKFIAGGEDMWVHVFDFHTGKELGCNKGHHGPIHCVRFAPGGESYASGSEDGTIRIWLTS
PVSREESDAVPGNAPNPKVKAVADEVTRKIKSSLHIGTA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaaaaaggtggctttaccgttagtgtgccatgggcattcaaggccggttgtt
gatttgttctacagccccattacccctgatgggtattttcttatcagtgccagtaaagac
tccactccaatgttaagaaatggggagactggagattggattggcacatttgaagggcat
aaaggtgcagtatggagctcctgtctggataccaatgcattacgtgctgcatctgcctcg
gctgatttttccgcgaaactatgggatgcattgactggagatgaattgcactcatttgaa
cacaagcatattgttcgagcatgtgcattttcggaggatacacatcatctactcacgggt
ggagttgagaaaattcttcgaatatttgatttgaatcgtcttgatgcagcaccaagagaa
gtggataattctcctggttcagttagaactgttgcatggctccacagtgaccagaccatt
ttaagttcttgtagtgatactagtggtgttaggttgtgggatctgagaagcggcaaaatt
gttcaaacacttgaaacaaaatcacccgtcactagtgctgaagtgagtcaggatggtcgc
tatataaccaccgctgacggatctactgttaagttctgggattcaaatcattttgagttg
gtgaaaagctacgacatgccatgcaatgtagaatcagcttcattggagccaaagcatggc
aataagttcattgctggtggagaagatatgtgggtgcacgtgtttgattttcatactgga
aaagagcttggttgcaacaagggtcaccatggtcctatccactgtgtacgttttgcacct
ggaggggaatcctatgcttcaggatctgaagatggcaccattagaatatggttgacaagt
ccagtgagtcgtgaagagagtgatgcagtacctggaaatgcaccaaatccaaaagtgaag
gctgtggctgatgaggttacccgtaagatcaagagtagccttcatattggcaccgcatag
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