Gossypium arboreum (tree cotton): 108487153
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Entry
108487153 CDS
T05776
Name
(RefSeq) zinc finger CCCH domain-containing protein 25
KO
K13107
RNA-binding motif protein, X-linked 2
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gab03041
]
108487153
Spliceosome [BR:
gab03041
]
Complex B
Other components
RES complex
108487153
Complex C
108487153
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Torus
zf-CCCH
RRM_5
zf-CCCH_4
zf_CCCH_4
DIKK1-2-4_C-subdom2
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
108487153
NCBI-ProteinID:
XP_017646905
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All DBs
Position
5:6684738..6687030
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AA seq
373 aa
AA seq
DB search
MNPLTLVKRLQNINAKEADLGISEEASWHAKYKDSAYIFVGGLPYDLTEGDLLAVFAQYG
EIVDVNLVRDKGTGKSKGFAFLAYEDQRSTILAVDNLNGAQILGRIIRVDHAEKYKKKEE
EEDEEEEQKKKEARGVCYVFQRGECTRGAGCKFSHNEQRAANTGWGPQDNKSSRWGNDKY
EGSKKSDKSSGMQEHTVQEGFRSSRGDEKALEKRDGREGKRSRRYDGKDAGPASREDYSG
IEGKRLTRHNDDDRYKREEKRSRRHNDRDLEPRSVEDRHRRDENRSRRHGDDGEDRARLK
EDRKDESRSKRHGNDEFDPRPNGDHDRRGEKRILRNESESHPREERDKRGGEKRTGYNRD
SSSHRHGERNKNY
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgaatccattaacgttagtcaagcgattgcaaaacattaatgcgaaagaagcagactta
ggcatatcggaggaagcatcatggcacgccaagtacaaagattccgcttacatctttgtc
ggtggccttccgtatgacctcaccgaaggtgatctcctcgctgtttttgcccaatatgga
gaaattgtagacgttaatcttgttagagataagggtactgggaaatcaaaaggcttcgct
tttcttgcttatgaggaccagagaagtacaattcttgctgtagataatcttaacggagca
cagattttgggtcgaattataagggttgatcatgccgaaaagtataagaagaaagaagaa
gaagaagatgaagaggaagagcagaaaaaaaaggaggcccggggggtttgttatgttttc
cagagaggtgaatgtactcgcggcgctggatgtaaattttcccacaatgagcaaagagct
gccaatactggttggggtcctcaggataataaaagttcaagatggggaaatgacaaatac
gagggttcaaaaaagagcgacaaaagttccggcatgcaggagcatacagttcaagaaggt
tttcgatcatcaaggggtgatgagaaggccttagagaaaagagatgggagagaaggaaag
aggtctagaaggtacgatggtaaagatgctggaccagcatctagagaagattatagtggt
attgaaggaaagagattaacaaggcataatgatgatgatcggtataaaagggaagaaaaa
agatctagaaggcacaatgatcgcgatcttgagccaaggtcagtagaagatcgtcatagg
agagatgaaaatagatcaagaaggcatggtgacgatggagaagacagggctaggctcaaa
gaagataggaaggacgaaagtagatcaaaaaggcatggtaatgatgagtttgatccaagg
cctaacggagaccatgacaggagaggagaaaaacgaatcttaaggaatgaatcagaatct
catccaagagaagagcgtgataagagaggtggggagaaacggacaggctataacagggat
tcatcctcccatcgacatggggagagaaataaaaactattag
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